RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
TTC39B-201ENST00000297615 ALDH16A1Q8IZ83 802 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 OR4E2Q8NGC2 313 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 TESCQ96BS2 214 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 ASB16Q96NS5 453 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 CHCHD6Q9BRQ6 235 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 ZDHHC5Q9C0B5 715 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 KLHL31Q9H511 634 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 IMPAD1Q9NX62 359 aa12.93□□□□□ -0.34
TTC39B-201ENST00000297615 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 A8MU76 341 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PCDH17O14917 1159 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 SCAMP2O15127 329 aaKnown RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 STSP08842 583 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 HPCAL1P37235 193 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PNLIPRP1P54315 467 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 OLR1P78380 273 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 DUSP7Q16829 419 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 COLEC12Q5KU26 742 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PRAMEF13Q5VWM6 474 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 DSG4Q86SJ6 1040 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 OR10G6Q8NH81 332 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 SLC5A11Q8WWX8 675 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PATE1Q8WXA2 126 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 SMARCD2Q92925 531 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 TSACCQ96A04 125 aaPredicted RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 DACH2Q96NX9 599 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 CEP44Q9C0F1 390 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 CHCHD3Q9NX63 227 aaKnown RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 FBXL12Q9NXK8 326 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 TMEM9Q9P0T7 183 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 IL20RAQ9UHF4 553 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PCDHB11Q9Y5F2 797 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 A0A1W2PRB8 838 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 C1GALT1C1LP0DN25 315 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 EIF2B2P49770 351 aaKnown RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 CRYBA2P53672 197 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 GRSF1Q12849 480 aaKnown RBP eCLIP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 MAD2L1BPQ15013 274 aaPredicted RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 EXOC3L2Q2M3D2 409 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 TAGAPQ8N103 731 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 NKX2-4Q9H2Z4 354 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 EXOSC4Q9NPD3 245 aaKnown RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 MAN2B2Q9Y2E5 1009 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 INHBBP09529 407 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 LIPAP38571 399 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 MAPK12P53778 367 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 IFITM3Q01628 133 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 ELAVL3Q14576 367 aaKnown RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 HIST2H2ACQ16777 129 aaPredicted RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 HIST2H2AA3Q6FI13 130 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 ENTHD1Q8IYW4 607 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 PGBD3Q8N328 593 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 STX19Q8N4C7 294 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 ANKRD53Q8N9V6 530 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 C16orf78Q8WTQ4 265 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 LGALS12Q96DT0 336 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 RETREG1Q9H6L5 497 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 SLAMF7Q9NQ25 335 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
TTC39B-201ENST00000297615 CAB39Q9Y376 341 aaPredicted RBP12.92□□□□□ -0.34
TTC39B-201ENST00000297615 POM121BA6NF01 834 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 EFCAB9A8MZ26 197 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 TBX1O43435 398 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 BMP4P12644 408 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 TIA1P31483 386 aaKnown RBP eCLIP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 MED22Q15528 200 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 EIF3MQ7L2H7 374 aaKnown RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 SERPINA11Q86U17 422 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 METTL3Q86U44 580 aaKnown RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 LGI4Q8N135 537 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 TCAIMQ8N3R3 496 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 CPA6Q8N4T0 437 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 C11orf65Q8NCR3 313 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 OR10G2Q8NGC3 310 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 OR8K5Q8NH50 307 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 ZCCHC10Q8TBK6 192 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 OTULINQ96BN8 352 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 HMG20AQ9NP66 347 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 ACOT13Q9NPJ3 140 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 DUSP12Q9UNI6 340 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 RNF6Q9Y252 685 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 STON1Q9Y6Q2 735 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 FREM2Q5SZK8 3169 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 ISM1B1AKI9 464 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 JUNBP17275 347 aaPredicted RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 GTF2E2P29084 291 aaKnown RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 TPP2P29144 1249 aaPredicted RBP12.91□□□□□ -0.34
TTC39B-201ENST00000297615 CTSKP43235 329 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 BCAP31P51572 246 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 SLC35A2P78381 396 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 CBX3Q13185 183 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 TUBA3CQ13748 450 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 RUNX3Q13761 415 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 FGL2Q14314 439 aa12.91□□□□□ -0.34
TTC39B-201ENST00000297615 RFX4Q33E94 735 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms