RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 DCUN1D3Q8IWE4 304 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ENTHD1Q8IYW4 607 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CPA6Q8N4T0 437 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 HORMAD2Q8N7B1 307 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 OR5K2Q8NHB8 316 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 FBLIM1Q8WUP2 373 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 TM4SF18Q96CE8 201 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 MAGED4Q96JG8 741 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 C12orf66Q96MD2 445 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 FERD3LQ96RJ6 166 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ADPRHL2Q9NX46 363 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 PCDHGA6Q9Y5G7 932 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ANKDD1BA6NHY2 528 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 C1QTNF3-AMACRE9PGA6 284 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 SEMA7AO75326 666 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 JRKO75564 520 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 C9P02748 559 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 LCKP06239 509 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 KELP23276 732 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 C21orf33P30042 268 aaPredicted RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 GDI1P31150 447 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 NUP107P57740 925 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 SLC35A2P78381 396 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 GRSF1Q12849 480 aaKnown RBP eCLIP11.23□□□□□ -0.61
RHO-201ENST00000296271 EIF4HQ15056 248 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 DUSP6Q16828 381 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 KHDRBS2Q5VWX1 349 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 SZRD1Q7Z422 152 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 SNX29P2Q8IUI4 249 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 CCDC103Q8IW40 242 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ZNF540Q8NDQ6 660 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 OR52N2Q8NGI0 321 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 GOT1L1Q8NHS2 421 aaPredicted RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
RHO-201ENST00000296271 ZNF420Q8TAQ5 688 aaPredicted RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 GTPBP3Q969Y2 492 aaKnown RBP11.23□□□□□ -0.61
RHO-201ENST00000296271 MDC1Q14676 2089 aaKnown RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 TRBV23OR9-2A0A075B6M9 112 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 IGFBP1P08833 259 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 PTX3P26022 381 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 BMXP51813 675 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 HNRNPFP52597 415 aaKnown RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 MAPK12P53778 367 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 TFF2Q03403 129 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 EPS8Q12929 822 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 TMED1Q13445 227 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 CTF1Q16619 201 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 ZC3H12BQ5HYM0 836 aaKnown RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 DEPDC1Q5TB30 811 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 KIAA1614Q5VZ46 1190 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 LCTLQ6UWM7 567 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 ADAMTSL4Q6UY14 1074 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 COMTD1Q86VU5 262 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 CACTIN-AS1Q8N1I8 211 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 ZNF513Q8N8E2 541 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 NDNFQ8TB73 568 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 GANCQ8TET4 914 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 PROX1Q92786 737 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 TEFMQ96QE5 360 aaKnown RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 C17orf62Q9BQA9 187 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 HDAC8Q9BY41 377 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 RNF6Q9Y252 685 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 SNX5Q9Y5X3 404 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 FAM20BO75063 409 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 NDUFS2O75306 463 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 BCHEP06276 602 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 ADRA2AP08913 450 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 RPS6KA3P51812 740 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 VBP1P61758 197 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 LSM11P83369 360 aaKnown RBP eCLIP11.22□□□□□ -0.61
RHO-201ENST00000296271 BIRC2Q13490 618 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 PUM1Q14671 1186 aaKnown RBP eCLIP11.22□□□□□ -0.61
RHO-201ENST00000296271 DHRS4L2Q6PKH6 230 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 UNC5DQ6UXZ4 953 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 CEACAM20Q6UY09 585 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 TP53I13Q8NBR0 393 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 OR5D16Q8NGK9 328 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 ABTB1Q969K4 478 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 ZNF514Q96K75 400 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 FCRL4Q96PJ5 515 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 YIPF4Q9BSR8 244 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 MS4A8Q9BY19 250 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 RAD21L1Q9H4I0 556 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 SERHL2Q9H4I8 314 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 EHD1Q9H4M9 534 aa11.22□□□□□ -0.61
RHO-201ENST00000296271 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
RHO-201ENST00000296271 PRAMEF27A3QJZ7 478 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 ZNF701M0R085 212 aaPredicted RBP11.21□□□□□ -0.61
RHO-201ENST00000296271 FFAR1O14842 300 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 SLC31A1O15431 190 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 UGT2B11O75310 529 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 EML2O95834 649 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 SLC35G4P0C7Q5 338 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 PSMB9P28065 219 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 PIK3CBP42338 1070 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 IDH2P48735 452 aaKnown RBP11.21□□□□□ -0.61
RHO-201ENST00000296271 CRISP3P54108 245 aa11.21□□□□□ -0.61
RHO-201ENST00000296271 LIM2P55344 173 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms