RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 CCL11P51671 97 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 SLAMF1Q13291 335 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 HDXQ7Z353 690 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 CENPKQ9BS16 269 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 SEMA4CQ9C0C4 833 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 STMN4Q9H169 189 aaPredicted RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 DDX31Q9H8H2 851 aaKnown RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 MLXIPLQ9NP71 852 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 BOD1L1Q8NFC6 3051 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 GOLGA6L10A6NI86 522 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 PSMD12O00232 456 aaPredicted RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 TMPRSS11DO60235 418 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 NPHS1O60500 1241 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ULK1O75385 1050 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 MAOAP21397 527 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 JAK1P23458 1154 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 TSFMP43897 325 aaKnown RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ARFIP1P53367 373 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 EEF1A2Q05639 463 aaKnown RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 TBL3Q12788 808 aaKnown RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ASPHQ12797 758 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ARL13AQ5H913 290 aaPredicted RBP18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ANKRD37Q7Z713 158 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 CUZD1Q86UP6 607 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 NUDCD3Q8IVD9 361 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 WBP1Q96G27 269 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 FER1L6-AS2Q96M78 137 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 ACPTQ9BZG2 426 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 BRF2Q9HAW0 419 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 LYRM4Q9HD34 91 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 FBXW2Q9UKT8 454 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 CLDN16Q9Y5I7 305 aa18.69■□□□□ 0.58
TIMP4-201ENST00000287814 SMG1Q96Q15 3661 aaKnown RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ATRXP46100 2492 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 IGHV1-45A0A0A0MS14 117 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 A0A0A6YYD5 115 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 A0A1W2PQ72 361 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 TMEM120BA0PK00 339 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 TGFBR3LH3BV60 316 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ATXN7O15265 892 aaPredicted RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 PRMT3O60678 531 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 SEMA3DO95025 777 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ZWINTO95229 277 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 HNRNPH2P55795 449 aaKnown RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 Q0VFX4 171 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 GALNT1Q10472 559 aaPredicted RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 PCOLCEQ15113 449 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 NSDHLQ15738 373 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 CLEC6AQ6EIG7 209 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 MRM1Q6IN84 353 aaKnown RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 QSOX2Q6ZRP7 698 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 METTL4Q8N3J2 472 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ZCCHC7Q8N3Z6 543 aaKnown RBP18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ANKRD42Q8N9B4 389 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 METTL21AQ8WXB1 218 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 PTCHD1Q96NR3 888 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 TRMOQ9BU70 441 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 ATG4BQ9Y4P1 393 aa18.68■□□□□ 0.58
TIMP4-201ENST00000287814 IGKV3D-11A0A0A0MRZ8 115 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 A6NL46 340 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 K7EM74 188 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 SASH3O75995 380 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 CYC1P08574 325 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 RRADP55042 308 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 WDR4P57081 412 aaKnown RBP18.67■□□□□ 0.58
TIMP4-201ENST00000287814 HMGCS1Q01581 520 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 CPEB2Q7Z5Q1 589 aaKnown RBP18.67■□□□□ 0.58
TIMP4-201ENST00000287814 ABHD17AQ96GS6 310 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 WDR77Q9BQA1 342 aaPredicted RBP18.67■□□□□ 0.58
TIMP4-201ENST00000287814 ZNF160Q9HCG1 818 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 ASB4Q9Y574 426 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 NUP210LQ5VU65 1888 aa18.67■□□□□ 0.58
TIMP4-201ENST00000287814 H3BQF6 201 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 KLK1P06870 262 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 TPP2P29144 1249 aaPredicted RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 CSTF3Q12996 717 aaKnown RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 KCNAB2Q13303 367 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 RCN2Q14257 317 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 SOWAHCQ53LP3 525 aaPredicted RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 AGBL2Q5U5Z8 902 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 C18orf63Q68DL7 685 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 NDUFAF7Q7L592 441 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 SCUBE1Q8IWY4 988 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 PARP9Q8IXQ6 854 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 FDCSPQ8NFU4 85 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 ZNF700Q9H0M5 742 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 ZNF395Q9H8N7 513 aaPredicted RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 VIPAS39Q9H9C1 493 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 ATP13A2Q9NQ11 1180 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 PRDM9Q9NQV7 894 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 VPS29Q9UBQ0 182 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 WASHC1A8K0Z3 465 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 BIRC5O15392 142 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 PRKRAO75569 313 aaKnown RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 CEACAM4O75871 244 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 SEC24DO94855 1032 aaPredicted RBP18.66■□□□□ 0.58
TIMP4-201ENST00000287814 HPP00738 406 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 FAM58BPP0C7Q3 252 aa18.66■□□□□ 0.58
TIMP4-201ENST00000287814 UROSP10746 265 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms