RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 RHOXF2BP0C7M4 288 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 CD46P15529 392 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 HIST1H1TP22492 207 aaPredicted RBP17.72■□□□□ 0.43
MALSU1-201ENST00000287543 CERS1P27544 350 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 RAP1GDS1P52306 607 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 SRSF1Q07955 248 aaKnown RBP eCLIP17.72■□□□□ 0.43
MALSU1-201ENST00000287543 BIKQ13323 160 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 ADNP2Q6IQ32 1131 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 GOLGA7Q7Z5G4 137 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 BEST3Q8N1M1 668 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 TMEM132CQ8N3T6 1108 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 PTGR2Q8N8N7 351 aaPredicted RBP17.72■□□□□ 0.43
MALSU1-201ENST00000287543 ACOT4Q8N9L9 421 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 L3MBTL4Q8NA19 623 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 B3GNT7Q8NFL0 401 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 RHOXF2Q9BQY4 288 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 DEFB126Q9BYW3 111 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 MRPL46Q9H2W6 279 aaKnown RBP17.72■□□□□ 0.43
MALSU1-201ENST00000287543 ADAP2Q9NPF8 381 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 XPR1Q9UBH6 696 aa17.72■□□□□ 0.43
MALSU1-201ENST00000287543 PPIEQ9UNP9 301 aaKnown RBP17.72■□□□□ 0.43
MALSU1-201ENST00000287543 TNRC6AQ8NDV7 1962 aaKnown RBP17.71■□□□□ 0.43
MALSU1-201ENST00000287543 IQANK1A0A1B0GTG1 560 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 CLDN9O95484 217 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 SSR2P43308 183 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 CLCN2P51788 898 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 TUBA3CQ13748 450 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 FCRLBQ6BAA4 426 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 OR4C11Q6IEV9 310 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 TUBA3EQ6PEY2 450 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 ADGRD1Q6QNK2 874 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 UBE3DQ7Z6J8 389 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 FAM47BQ8NA70 645 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 NFAM1Q8NET5 270 aaPredicted RBP17.71■□□□□ 0.43
MALSU1-201ENST00000287543 DAZLQ92904 295 aaKnown RBP17.71■□□□□ 0.43
MALSU1-201ENST00000287543 CDCP1Q9H5V8 836 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 DMRT3Q9NQL9 472 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 PNO1Q9NRX1 252 aaKnown RBP17.71■□□□□ 0.43
MALSU1-201ENST00000287543 KCMF1Q9P0J7 381 aa17.71■□□□□ 0.43
MALSU1-201ENST00000287543 MDC1Q14676 2089 aaKnown RBP17.71■□□□□ 0.43
MALSU1-201ENST00000287543 GABRR3A8MPY1 467 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 FOXE1O00358 373 aaPredicted RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 FCHO1O14526 889 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 MYO1DO94832 1006 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 SIX3O95343 332 aaPredicted RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 F10P00742 488 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 EEF1DP29692 281 aaKnown RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 TLX1P31314 330 aaPredicted RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 CD96P40200 585 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 OC90Q02509 493 aaPredicted RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 STX4Q12846 297 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 CUL3Q13618 768 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 DDX39BQ13838 428 aaKnown RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 ELAVL1Q15717 326 aaKnown RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 ZNF766Q5HY98 468 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 ARMC10Q8N2F6 343 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 TMEM178AQ8NBL3 297 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 SSC4DQ8WTU2 575 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 PHF21BQ96EK2 531 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 VMP1Q96GC9 406 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 C5orf34Q96MH7 638 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 SLX1AQ9BQ83 275 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 OR51B5Q9H339 312 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 NOL11Q9H8H0 719 aaKnown RBP17.7■□□□□ 0.42
MALSU1-201ENST00000287543 ZNF358Q9NW07 568 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 PHF11Q9UIL8 331 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 PPT2Q9UMR5 302 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 CLCA3PQ9Y6N3 262 aa17.7■□□□□ 0.42
MALSU1-201ENST00000287543 UBR5O95071 2799 aaPredicted RBP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 A8MUA0 341 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 MLYCDO95822 493 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 IFNA16P05015 189 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 TAC1P20366 129 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 CPN2P22792 545 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 PPP2R1BP30154 601 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 ARL1P40616 181 aaPredicted RBP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 CCNG1P51959 295 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 MLF1P58340 268 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 OR1C1Q15619 314 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 CPSF6Q16630 551 aaKnown RBP eCLIP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 ZNF793Q6ZN11 406 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 ZCCHC7Q8N3Z6 543 aaKnown RBP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 FAM98AQ8NCA5 519 aaKnown RBP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 ACMSDQ8TDX5 336 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 NR4A3Q92570 626 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 MTERF1Q99551 399 aaKnown RBP17.69■□□□□ 0.42
MALSU1-201ENST00000287543 ALOXE3Q9BYJ1 711 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 VTI1BQ9UEU0 232 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 SLC5A6Q9Y289 635 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 CCDC88CQ9P219 2028 aa17.69■□□□□ 0.42
MALSU1-201ENST00000287543 TENM4Q6N022 2769 aa17.68■□□□□ 0.42
MALSU1-201ENST00000287543 LRRC14BA6NHZ5 514 aa17.68■□□□□ 0.42
MALSU1-201ENST00000287543 RTCAO00442 366 aaKnown RBP17.68■□□□□ 0.42
MALSU1-201ENST00000287543 ZFAND5O76080 213 aa17.68■□□□□ 0.42
MALSU1-201ENST00000287543 TRHRP34981 398 aaPredicted RBP17.68■□□□□ 0.42
MALSU1-201ENST00000287543 CYB561P49447 251 aa17.68■□□□□ 0.42
MALSU1-201ENST00000287543 RPS13P62277 151 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms