RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 CDKN2DP55273 166 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ACY1Q03154 408 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 PLP2Q04941 152 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 SCN1BQ07699 218 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 E2F2Q14209 437 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ALG1LQ6GMV1 187 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 SHKBP1Q8TBC3 707 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 RHBDD1Q8TEB9 315 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 HLA-CQ95604 372 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF317Q96PQ6 595 aaPredicted RBP17.8■□□□□ 0.44
PCDH1-201ENST00000287008 BOCQ9BWV1 1114 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 CPEB1Q9BZB8 566 aaKnown RBP17.8■□□□□ 0.44
PCDH1-201ENST00000287008 HBQ1P09105 142 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 HOXC13P31276 330 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ARL9Q6T311 187 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ADAMTS18Q8TE60 1221 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ISG20Q96AZ6 181 aaKnown RBP17.8■□□□□ 0.44
PCDH1-201ENST00000287008 ZFP3Q96NJ6 502 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 HSFX1Q9UBD0 423 aa17.8■□□□□ 0.44
PCDH1-201ENST00000287008 H6PDO95479 791 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SLC16A8O95907 504 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SCML4Q8N228 414 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SETD6Q8TBK2 473 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 NPIPB15A6NHN6 443 aaPredicted RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SAGE2PA6NJ88 616 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ALDH3A2P51648 485 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 CASP6P55212 293 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SPATS1Q496A3 300 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 GPAT4Q86UL3 456 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 YIPF7Q8N8F6 280 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 THEM6Q8WUY1 208 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 AURKBQ96GD4 344 aaPredicted RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 APOOQ9BUR5 198 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 PCDHB14Q9Y5E9 798 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 TOPAZ1Q8N9V7 1692 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 A0A1W2PRQ8 180 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF670-ZNF695F2Z2N8 137 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SDHDO14521 159 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ADAM12O43184 909 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 OR12D1P0DN82 309 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 CD72P21854 359 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 EIF1AXP47813 144 aaKnown RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ARSFP54793 590 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 NSDHLQ15738 373 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 FAM86B1Q8N7N1 296 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ACVR1CQ8NER5 493 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 HUS1BQ8NHY5 278 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 C1orf216Q8TAB5 229 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SLC22A8Q8TCC7 542 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 GFM1Q96RP9 751 aaKnown RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 CSNK1G1Q9HCP0 422 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 SPO11Q9Y5K1 396 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 ENTPD2Q9Y5L3 495 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 TLX2O43763 284 aaPredicted RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 CSTBP04080 98 aaKnown RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 PORP16435 677 aaPredicted RBP17.79■□□□□ 0.44
PCDH1-201ENST00000287008 GJA8P48165 433 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 STARP49675 285 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 TIGD6Q17RP2 521 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 STEAP4Q687X5 459 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 Q6ZSR6 202 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 KLHDC9Q8NEP7 349 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 OR8K5Q8NH50 307 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 LRRC46Q96FV0 321 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 PPP4R1LQ9P1A2 415 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 HCSTQ9UBK5 93 aa17.79■□□□□ 0.44
PCDH1-201ENST00000287008 MYH13Q9UKX3 1938 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 FEZF1A0PJY2 475 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 NPTX1Q15818 432 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 MANEALQ5VSG8 457 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 C1orf189Q5VU69 101 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF761Q86XN6 746 aaPredicted RBP17.78■□□□□ 0.44
PCDH1-201ENST00000287008 SNTG1Q9NSN8 517 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 GPRC5BQ9NZH0 403 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ANKMY1Q9P2S6 941 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF99A8MXY4 864 aaPredicted RBP17.78■□□□□ 0.44
PCDH1-201ENST00000287008 NOS1APO75052 506 aaPredicted RBP17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ZNF821O75541 412 aaPredicted RBP17.78■□□□□ 0.44
PCDH1-201ENST00000287008 PPP1R3AQ16821 1122 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 KLHDC8AQ8IYD2 350 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 HSPBAP1Q96EW2 488 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 TOE1Q96GM8 510 aaKnown RBP17.78■□□□□ 0.44
PCDH1-201ENST00000287008 C1orf21Q9H246 121 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ASB6Q9NWX5 421 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 A0A096LPI6 279 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 CCNOP22674 350 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 FAM189A2Q15884 450 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ARHGAP22Q7Z5H3 698 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 TMCO6Q96DC7 493 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ZFYVE21Q9BQ24 234 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 EPHA6Q9UF33 1036 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 MGAT4BQ9UQ53 548 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 FKBP7Q9Y680 259 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 CCDC88AQ3V6T2 1871 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 RNF13O43567 381 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 ARL6IP5O75915 188 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 SOX14O95416 240 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 RAB36O95755 333 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 EDNRAP25101 427 aa17.78■□□□□ 0.44
PCDH1-201ENST00000287008 PMS2P3Q13401 168 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms