RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 SELPP16109 830 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 MVDP53602 400 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 FAPQ12884 760 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 PPIGQ13427 754 aaKnown RBP eCLIP9.94□□□□□ -0.82
SKA1-201ENST00000285116 ASAH1Q13510 395 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 MICAQ29983 383 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 CDONQ4KMG0 1287 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ATP13A5Q4VNC0 1218 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ZNF605Q86T29 641 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TMEM150AQ86TG1 271 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 RDH10Q8IZV5 341 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 FIBINQ8TAL6 211 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 SNAPC3Q92966 411 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 P2RY13Q9BPV8 354 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 MMP28Q9H239 520 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 GPR83Q9NYM4 423 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ZNF226Q9NYT6 803 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 SPEF1Q9Y4P9 236 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 YIPF1Q9Y548 306 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TRANK1O15050 2925 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 A0A1W2PQ72 361 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TEX28O15482 410 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 RGS5O15539 181 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 CYP7B1O75881 506 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 LRATO95237 230 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 IRF1P10914 325 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 LAMP1P11279 417 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ATP1B2P14415 290 aaPredicted RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 CD22P20273 847 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 AP2S1P53680 142 aaPredicted RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 SMAD3P84022 425 aaKnown RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 PTSQ03393 145 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 BAK1Q16611 211 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 CCNJQ5T5M9 372 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 CPTPQ5TA50 214 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 RNLSQ5VYX0 342 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 LRRC66Q68CR7 880 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TIGD3Q6B0B8 471 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ZNF767PQ75MW2 155 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TSPAN33Q86UF1 283 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TMEM173Q86WV6 379 aaPredicted RBP9.94□□□□□ -0.82
SKA1-201ENST00000285116 APCDD1Q8J025 514 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 VWA5B2Q8N398 1253 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 NATD1Q8N6N6 113 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 ASB15Q8WXK1 588 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 WDFY2Q96P53 400 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 MAPKAP1Q9BPZ7 522 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TM6SF2Q9BZW4 377 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 SRRQ9GZT4 340 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 NDOR1Q9UHB4 597 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 MOSPD1Q9UJG1 213 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 TMPRSS11EQ9UL52 423 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 SLC22A14Q9Y267 594 aa9.94□□□□□ -0.82
SKA1-201ENST00000285116 A0A1W2PQ09 198 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 SLC35F4A4IF30 521 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 OR6C70A6NIJ9 312 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 TNFRSF11BO00300 401 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 QSOX1O00391 747 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 IDSP22304 550 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 MYL9P24844 172 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 OR1D2P34982 312 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 SNRPD1P62314 119 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 CD83Q01151 205 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 EEF1A2Q05639 463 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 ST3GAL4Q11206 333 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 HYAL2Q12891 473 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 PDE7AQ13946 482 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 GPNMBQ14956 572 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 IFI44LQ53G44 452 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CRB2Q5IJ48 1285 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CLECL1Q8IZS7 167 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 LSMEM1Q8N8F7 131 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 DBF4BQ8NFT6 615 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 OR10G2Q8NGC3 310 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.93□□□□□ -0.822e-12■■■□□ 16.9
SKA1-201ENST00000285116 CLP1Q92989 425 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 WDR34Q96EX3 536 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 FRMD6Q96NE9 622 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 KCNC2Q96PR1 638 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 FEVQ99581 238 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 KLHL21Q9UJP4 597 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 HS3ST2Q9Y278 367 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 GABRR3A8MPY1 467 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 FADS2P1A8MWK0 482 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CACNB4O00305 520 aaPredicted RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 ALDH1A1P00352 501 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 C1QCP02747 245 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 C1SP09871 688 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CHMP24386 653 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 HLA-DMAP28067 261 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 RPL3P39023 403 aaKnown RBP9.93□□□□□ -0.82
SKA1-201ENST00000285116 SPINT3P49223 89 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 CYP4F2P78329 520 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 TLE2Q04725 743 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 ACSM2AQ08AH3 577 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 EFR3AQ14156 821 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 VEPH1Q14D04 833 aa9.93□□□□□ -0.82
SKA1-201ENST00000285116 ZNF79Q15937 498 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms