RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 FEVQ99581 238 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 HEPHQ9BQS7 1158 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 DCSTAMPQ9H295 470 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 EHD1Q9H4M9 534 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 TRPV5Q9NQA5 729 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CD84Q9UIB8 345 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CFAP54Q96N23 3096 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ARRDC5A6NEK1 342 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ANTXRLA6NF34 631 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PLK4O00444 970 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 AIREO43918 545 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GCM2O75603 506 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 LCKP06239 509 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 NUDT7P0C024 238 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 IMPA1P29218 277 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CTSKP43235 329 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 MVDP53602 400 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 LSM3P62310 102 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 IFITM3Q01628 133 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF763Q0D2J5 394 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GAB1Q13480 694 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 DDX39BQ13838 428 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PDE7AQ13946 482 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GAS6Q14393 721 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 MICAQ29983 383 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CRB2Q5IJ48 1285 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PERM1Q5SV97 790 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GCNT6Q5T4J0 391 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 TRIM40Q6P9F5 258 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 UNC5DQ6UXZ4 953 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 PAGE2Q7Z2X7 111 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 TSEN54Q7Z6J9 526 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GALNT10Q86SR1 603 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 NLRP8Q86W28 1048 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 MAML2Q8IZL2 1156 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CHST14Q8NCH0 376 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 OR10G2Q8NGC3 310 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 C9orf43Q8TAL5 461 aaPredicted RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 SPPL2AQ8TCT8 520 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 FAM122AQ96E09 287 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 COL21A1Q96P44 957 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 CCM2Q9BSQ5 444 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 EFCAB11Q9BUY7 163 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
C9orf3-201ENST00000277198 ARMC7Q9H6L4 198 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 C2orf42Q9NWW7 574 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 SLCO3A1Q9UIG8 710 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
C9orf3-201ENST00000277198 GNG14A0A1W2PPG7 69 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 UPK3BL1B0FP48 263 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 UPK3BL2E5RIL1 263 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 NPC1O15118 1278 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 PCDH7O60245 1069 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 MPZL2O60487 215 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 CNOT3O75175 753 aaKnown RBP12.35□□□□□ -0.43
C9orf3-201ENST00000277198 MTX2O75431 263 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 ETHE1O95571 254 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 SLC16A8O95907 504 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 RPLP0P05388 317 aaKnown RBP12.35□□□□□ -0.43
C9orf3-201ENST00000277198 TIGD6Q17RP2 521 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF630Q2M218 657 aaPredicted RBP12.35□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF181Q2M3W8 571 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
C9orf3-201ENST00000277198 Q6ZS52 159 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 Q6ZVL8 140 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 Q6ZVU0 165 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 KBTBD8Q8NFY9 601 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 CDC26Q8NHZ8 85 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 MED8Q96G25 268 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 PKP4Q99569 1192 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 RHNO1Q9BSD3 238 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
C9orf3-201ENST00000277198 SH3BP4Q9P0V3 963 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 DKK3Q9UBP4 350 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 TSC22D4Q9Y3Q8 395 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 PCDHGA2Q9Y5H1 932 aa12.35□□□□□ -0.43
C9orf3-201ENST00000277198 SH3D21A4FU49 640 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 METTL15A6NJ78 407 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 OR2AG2A6NM03 316 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 TSPAN6O43657 245 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 UPK1BO75841 260 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 CHRNB1P11230 501 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 GABRB1P18505 474 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 LIPAP38571 399 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 EIF2DP41214 584 aaKnown RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 CRATP43155 626 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF45Q02386 682 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 RUNX3Q13761 415 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ITPRIPL2Q3MIP1 535 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 TMEM236Q5W0B7 351 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 TSSK4Q6SA08 328 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 DPPA4Q7L190 304 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 SLC46A3Q7Z3Q1 461 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 TECPR1Q7Z6L1 1165 aa12.34□□□□□ -0.43
C9orf3-201ENST00000277198 ZNF605Q86T29 641 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms