RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CHFRQ96EP1 664 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 LIN37Q96GY3 246 aaPredicted RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 HS6ST2Q96MM7 605 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 HERC2P3Q9BVR0 1158 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 FUNDC2Q9BWH2 189 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 POLDIP3Q9BY77 421 aaKnown RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF334Q9HCZ1 680 aaPredicted RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 PNO1Q9NRX1 252 aaKnown RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SIRPGQ9P1W8 387 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ACSL6Q9UKU0 697 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 TECPR2O15040 1411 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC22A31A6NKX4 558 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF487B1APH4 448 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ADM5C9JUS6 153 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF701M0R085 212 aaPredicted RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 UQCRC1P31930 480 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 VIPR1P32241 457 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ALDH3B1P43353 468 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 LILRA4P59901 499 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 NKX6-1P78426 367 aaPredicted RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF763Q0D2J5 394 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SIRPB2Q5JXA9 342 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 OR5P2Q8WZ92 322 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF382Q96SR6 550 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC6A7Q99884 636 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ATG5Q9H1Y0 275 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ASB3Q9Y575 518 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CDC7O00311 574 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 SC5DO75845 299 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF616Q08AN1 781 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 FUT10Q6P4F1 479 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 LRRTM4Q86VH4 590 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 BEST4Q8NFU0 473 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CNOT9Q92600 299 aaKnown RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 OR4K3Q96R72 315 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CACNG6Q9BXT2 260 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 CD244Q9BZW8 370 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 MTFR1LQ9H019 292 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 REEP4Q9H6H4 257 aa8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 MEPEQ9NQ76 525 aaPredicted RBP8.4□□□□□ -1.06
SCUBE3-201ENST00000274938 A0A0J9YVX5 310 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 OR6C6A6NF89 314 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 NDUFS4O43181 175 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 FARS2O95363 451 aaKnown RBP8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 C6orf47O95873 294 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 SLC16A8O95907 504 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 AHSGP02765 367 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 AMY2BP19961 511 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 MAP2K4P45985 399 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 LIPKQ5VXJ0 399 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 ACOT13Q9NPJ3 140 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 TMEM45AQ9NWC5 275 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 PARPBPQ9NWS1 579 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 EPHA6Q9UF33 1036 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 CRYZL1O95825 349 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 NDUFV1P49821 464 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 PAFAH1B3Q15102 231 aaKnown RBP8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 CDNFQ49AH0 187 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 ATAD3CQ5T2N8 411 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 GDPGP1Q6ZNW5 385 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 PXKQ7Z7A4 578 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 LAS2Q8IYD9 372 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 WDSUB1Q8N9V3 476 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 OR6N2Q8NGY6 317 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 TSGA13Q96PP4 275 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 NELL2Q99435 816 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 SLC22A14Q9Y267 594 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 WDR45Q9Y484 360 aa8.4□□□□□ -1.07
SCUBE3-201ENST00000274938 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 F8W036 122 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 STMND1H3BQB6 276 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 SNAP29O95721 258 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 AGXTP21549 392 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 HNRNPFP52597 415 aaKnown RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 STC1P52823 247 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 ART1P52961 327 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 BLOC1S1P78537 153 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 CRHR2Q13324 411 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 SPHARQ15513 63 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 AKR1C8PQ5T2L2 129 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 ANKRD54Q6NXT1 300 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 GDPD4Q6W3E5 623 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 FTMTQ8N4E7 242 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 CNIH3Q8TBE1 160 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 VRK1Q99986 396 aaPredicted RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 C7orf50Q9BRJ6 194 aaKnown RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 KLHL21Q9UJP4 597 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 SLC7A11Q9UPY5 501 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 C2orf74A8MZ97 194 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 TSPAN15O95858 294 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 JUNP05412 331 aaKnown RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 DLDP09622 509 aaKnown RBP8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 PRKACBP22694 351 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 GK3PQ14409 553 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 NANOGP8Q6NSW7 305 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 C3P1Q6ZMU1 363 aa8.39□□□□□ -1.07
SCUBE3-201ENST00000274938 RNF130Q86XS8 419 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms