RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TRAPPC4Q9Y296 219 aa26.28■■□□□ 1.8
CBX4-201ENST00000269397 MYOFQ9NZM1 2061 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 RECKO95980 971 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 SCG5P05408 212 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 CSNK1DP48730 415 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 RPS26P11Q5JNZ5 115 aaPredicted RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 DPY19L3Q6ZPD9 716 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 WDR48Q8TAF3 677 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 SNX18Q96RF0 628 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 OR51B5Q9H339 312 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 C3orf14Q9HBI5 128 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 ENPP4Q9Y6X5 453 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 SH3D21A4FU49 640 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 FFAR1O14842 300 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 CYP17A1P05093 508 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 PTPN5P54829 565 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 SNRPD1P62314 119 aaKnown RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 RPS26P62854 115 aaKnown RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 MEF2AQ02078 507 aaPredicted RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 Q6ZNB5 142 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 CELF5Q8N6W0 485 aaKnown RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 ZNF461Q8TAF7 563 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 MAGEB10Q96LZ2 347 aaPredicted RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 FYTTD1Q96QD9 318 aaKnown RBP26.27■■□□□ 1.8
CBX4-201ENST00000269397 BRF2Q9HAW0 419 aa26.27■■□□□ 1.8
CBX4-201ENST00000269397 FADS2P1A8MWK0 482 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 CAP1Q01518 475 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 EEF1A2Q05639 463 aaKnown RBP26.26■■□□□ 1.79
CBX4-201ENST00000269397 C2orf80Q0P641 193 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 SPHARQ15513 63 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 SPIN4Q56A73 249 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 LIPKQ5VXJ0 399 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 ARMCX6Q7L4S7 300 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 COMMD6Q7Z4G1 85 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 CHST14Q8NCH0 376 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 FAM46DQ8NEK8 389 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 TMEM203Q969S6 136 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 WRAP53Q9BUR4 548 aaKnown RBP26.26■■□□□ 1.79
CBX4-201ENST00000269397 ASAH2Q9NR71 780 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 SH2B3Q9UQQ2 575 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 TLR4O00206 839 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 UGT2B17O75795 530 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 GSTM1P09488 218 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 IMPA1P29218 277 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 PBLDP30039 288 aaPredicted RBP26.26■■□□□ 1.79
CBX4-201ENST00000269397 CRYBB2P43320 205 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 RORCP51449 518 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 LIM2P55344 173 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 CDK10Q15131 360 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 TOR1AIP1Q5JTV8 583 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 Q6ZVL8 140 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 GPR65Q8IYL9 337 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 RANGRFQ9HD47 186 aaPredicted RBP26.26■■□□□ 1.79
CBX4-201ENST00000269397 PCDHGB2Q9Y5G2 931 aa26.26■■□□□ 1.79
CBX4-201ENST00000269397 TSPAN6O43657 245 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 CSF2P04141 144 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 LRRC74AQ0VAA2 488 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 GPNMBQ14956 572 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 UAP1L1Q3KQV9 507 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.25■■□□□ 1.79
CBX4-201ENST00000269397 ZFYVE19Q96K21 471 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 BHLHE41Q9C0J9 482 aaPredicted RBP26.25■■□□□ 1.79
CBX4-201ENST00000269397 NUFIP1Q9UHK0 495 aaKnown RBP26.25■■□□□ 1.79
CBX4-201ENST00000269397 GRIP1Q9Y3R0 1128 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 H3BN98 237 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 PRRG1O14668 218 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 HBQ1P09105 142 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 PSMA1P25786 263 aaKnown RBP26.25■■□□□ 1.79
CBX4-201ENST00000269397 CYP4F8P98187 520 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 ZNF763Q0D2J5 394 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 PUM1Q14671 1186 aaKnown RBP eCLIP26.25■■□□□ 1.791e-6■■□□□ 12
CBX4-201ENST00000269397 SYTL3Q4VX76 610 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 SNAP47Q5SQN1 464 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 KRT73Q86Y46 540 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 LAS2Q8IYD9 372 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 PPCDCQ96CD2 204 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 ECHDC3Q96DC8 303 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 POLR2J2Q9GZM3 115 aaKnown RBP26.25■■□□□ 1.79
CBX4-201ENST00000269397 SRRQ9GZT4 340 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 LSM2Q9Y333 95 aaKnown RBP26.25■■□□□ 1.79
CBX4-201ENST00000269397 SNX11Q9Y5W9 270 aa26.25■■□□□ 1.79
CBX4-201ENST00000269397 KPNA5O15131 536 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 CLEC2LP0C7M8 214 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 PSPHP78330 225 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 FCHO2Q0JRZ9 810 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 VEPH1Q14D04 833 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 TRIM40Q6P9F5 258 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 CMTM8Q8IZV2 173 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 PLD2O14939 933 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 IFNW1P05000 195 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 PDHA2P29803 388 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 SSTR4P31391 388 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 DDOSTP39656 456 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 HMGA2P52926 109 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 CTSCP53634 463 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 TAS2R50P59544 299 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 SEC23BQ15437 767 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 FAM131AQ6UXB0 335 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 HSD11B1LQ7Z5J1 315 aa26.24■■□□□ 1.79
CBX4-201ENST00000269397 NPAS4Q8IUM7 802 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 422.9 ms