RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 SVOPQ8N4V2 548 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SMYD1Q8NB12 490 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 NDNFQ8TB73 568 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SUSD6Q92537 303 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 DNASE1L2Q92874 299 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 RAD51AP1Q96B01 352 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 YIPF6Q96EC8 236 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SLC6A16Q9GZN6 736 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 TMEM245Q9H330 911 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CUEDC1Q9NWM3 386 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 PCDHGA6Q9Y5G7 932 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CORINQ9Y5Q5 1042 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SNX8Q9Y5X2 465 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CCDC88CQ9P219 2028 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 C1QTNF3-AMACRE9PGA6 284 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 PTX3P26022 381 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 PSMB5P28074 263 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 TPP2P29144 1249 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 EEF1A2Q05639 463 aaKnown RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 RBBP4Q09028 425 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 FADDQ13158 208 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 NR1D2Q14995 579 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CLCA4Q14CN2 919 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 DUS1LQ6P1R4 473 aaKnown RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 Q6ZNX1 250 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SLC9B2Q86UD5 537 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 AMZ2Q86W34 360 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 C17orf64Q86WR6 236 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 OR4C15Q8NGM1 316 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 SNRNP27Q8WVK2 155 aaKnown RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 TFGQ92734 400 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 ZNF300Q96RE9 604 aaPredicted RBP12.31□□□□□ -0.44
CPSF6-201ENST00000266679 TMEM38AQ9H6F2 299 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CXorf36Q9H7Y0 433 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 CCNB1IP1Q9NPC3 277 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 C1GALT1Q9NS00 363 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 ANGPT4Q9Y264 503 aa12.31□□□□□ -0.44
CPSF6-201ENST00000266679 PRAMEF33A0A0G2JMD5 474 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 TBC1D3BA6NDS4 549 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 E9PQ18 207 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 PLPP1O14494 284 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 TOR1BO14657 336 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 PRAMEF10O60809 474 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 KRT75O95678 551 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 EPHX1P07099 455 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ARAFP10398 606 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 OPRL1P41146 370 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ALDH9A1P49189 494 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 EIF4HQ15056 248 aaKnown RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 SMAD2Q15796 467 aaKnown RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ZNF630Q2M218 657 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 PROX2Q3B8N5 592 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 CCDC80Q76M96 950 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 FAM129CQ86XR2 697 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 OR9Q2Q8NGE9 314 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 MTERF3Q96E29 417 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 COX14Q96I36 57 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 HRASLS5Q96KN8 279 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ASB16Q96NS5 453 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 LGR4Q9BXB1 951 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 RAB23Q9ULC3 237 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 FEZF1A0PJY2 475 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 LCKP06239 509 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 GGT2P36268 569 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 DSTNP60981 165 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 VBP1P61758 197 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 RPS26P62854 115 aaKnown RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 DUSP6Q16828 381 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ADPRMQ3LIE5 342 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 SYT6Q5T7P8 510 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ADAMTSL4Q6UY14 1074 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 IKBIPQ70UQ0 350 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 GET4Q7L5D6 327 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 PRSS48Q7RTY5 328 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 LRRTM4Q86VH4 590 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 P2RY8Q86VZ1 359 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 ADGRF3Q8IZF5 1079 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 IPCEF1Q8WWN9 437 aaPredicted RBP12.3□□□□□ -0.44
CPSF6-201ENST00000266679 NIPSNAP1Q9BPW8 284 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
CPSF6-201ENST00000266679 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 DMDP11532 3685 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 IGLON5A6NGN9 336 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ANKDD1BA6NHY2 528 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 WASP42768 502 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ST13P50502 369 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 MAPK12P53778 367 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 CDK3Q00526 305 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 ATP1A4Q13733 1029 aa12.29□□□□□ -0.44
CPSF6-201ENST00000266679 GANABQ14697 944 aaKnown RBP12.29□□□□□ -0.44
CPSF6-201ENST00000266679 PUS10Q3MIT2 529 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms