RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 NUDT15Q9NV35 164 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 DUX4Q9UBX2 424 aa14.27□□□□□ -0.12
KCTD3-201ENST00000259154 HOXA2O43364 376 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 HCN1O60741 890 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 JRKO75564 520 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 SCNN1AP37088 669 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 RGRP47804 291 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 TAS2R50P59544 299 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 WASH2PQ6VEQ5 465 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 HSDL2Q6YN16 418 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 CXXC5Q7LFL8 322 aaKnown RBP14.27□□□□□ -0.13
KCTD3-201ENST00000259154 GALNT11Q8NCW6 608 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 LRR1Q96L50 414 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 SLC32A1Q9H598 525 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 BRD7Q9NPI1 651 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 HCN4Q9Y3Q4 1203 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 PIP5K1CO60331 668 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 RPS13P62277 151 aaKnown RBP14.27□□□□□ -0.13
KCTD3-201ENST00000259154 TOMM5Q8N4H5 51 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 NATD1Q8N6N6 113 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 OR51G2Q8NGK0 314 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 DNAJA3Q96EY1 480 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 DEFB118Q96PH6 123 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 TSGA13Q96PP4 275 aa14.27□□□□□ -0.13
KCTD3-201ENST00000259154 TRBV23OR9-2A0A075B6M9 112 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 STX16O14662 325 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 CYP17A1P05093 508 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 PROS1P07225 676 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ACPPP15309 386 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 CCND3P30281 292 aaPredicted RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 CTF1Q16619 201 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 GARNL3Q5VVW2 1013 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 SLC25A25Q6KCM7 469 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF548Q8NEK5 533 aaPredicted RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 SCLYQ96I15 445 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 TEFMQ96QE5 360 aaKnown RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 GALNT9Q9HCQ5 603 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 GULP1Q9UBP9 304 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 NUP50Q9UKX7 468 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 PCDH17O14917 1159 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 KCNK2O95069 426 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 HRGP04196 525 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 C8orf89P0DMQ9 161 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 MTHFD2P13995 350 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 GJA1P17302 382 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 BDKRB1P46663 353 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 EPHB3P54753 998 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 MAP4K2Q12851 820 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 RPS26P11Q5JNZ5 115 aaPredicted RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 TMIGD1Q6UXZ0 262 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 UROC1Q96N76 676 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 RSPH9Q9H1X1 276 aaPredicted RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 VCANP13611 3396 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF487B1APH4 448 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ENTPD6O75354 484 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ERP29P30040 261 aaKnown RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 SPAM1P38567 509 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 DEFB115Q30KQ5 88 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 PRSS36Q5K4E3 855 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF607Q96SK3 696 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 MBOAT4Q96T53 435 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 KCNH6Q9H252 994 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 CLEC2DQ9UHP7 191 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 RUVBL1Q9Y265 456 aaKnown RBP14.26□□□□□ -0.13
KCTD3-201ENST00000259154 FAM186AA6NE01 2351 aa14.26□□□□□ -0.13
KCTD3-201ENST00000259154 M0R233 179 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ADORA3P0DMS8 318 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 SSR2P43308 183 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 VSX2P58304 361 aaPredicted RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 OC90Q02509 493 aaPredicted RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 SERINC3Q13530 473 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF697Q5TEC3 545 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 CNIH2Q6PI25 160 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 CERS6Q6ZMG9 384 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 FAM20CQ8IXL6 584 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 KRT78Q8N1N4 520 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 OR2T35Q8NGX2 323 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 PXYLP1Q8TE99 480 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 CRELD1Q96HD1 420 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 TMEM80Q96HE8 168 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 HOXD1Q9GZZ0 328 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 LINC00597Q9H2U6 94 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 CARS2Q9HA77 564 aaKnown RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ZCCHC3Q9NUD5 404 aaKnown RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 AHSPQ9NZD4 102 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF69Q9UC07 566 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 UBE2QL1A1L167 161 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 STOMP27105 288 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 RPL4P36578 427 aaKnown RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ACVR1BP36896 505 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ATG9BQ674R7 924 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 OLFML2AQ68BL7 652 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 ZNF280BQ86YH2 543 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 NPAS3Q8IXF0 933 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 CDK20Q8IZL9 346 aa14.25□□□□□ -0.13
KCTD3-201ENST00000259154 TP53I13Q8NBR0 393 aaPredicted RBP14.25□□□□□ -0.13
KCTD3-201ENST00000259154 TRIM43Q96BQ3 446 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms