RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MANFP55145 182 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ABHD18Q0P651 414 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 INAQ16352 499 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 NEK10Q6ZWH5 1172 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SFTPA2Q8IWL1 248 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF555Q8NEP9 628 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 C16orf78Q8WTQ4 265 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 COL26A1Q96A83 441 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 TUBA1CQ9BQE3 449 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 TRIT1Q9H3H1 467 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 CAPN10Q9HC96 672 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 ORC6Q9Y5N6 252 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 SNX5Q9Y5X3 404 aa13.99□□□□□ -0.17
TRAFD1-201ENST00000257604 FRYLO94915 3013 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ARID1BQ8NFD5 2236 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 M0R3G1 203 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 AQP9O43315 295 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 CNOT3O75175 753 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 FADS2O95864 444 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 EIF2S1P05198 315 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ACSL1P33121 698 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 KDELR2P33947 212 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 GPC1P35052 558 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 NR4A2P43354 598 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 MASP1P48740 699 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF750Q32MQ0 723 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 INAVAQ3KP66 663 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 RPS26P11Q5JNZ5 115 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 IRAK1BP1Q5VVH5 260 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 DCUN1D3Q8IWE4 304 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ADHFE1Q8IWW8 467 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 FKBP10Q96AY3 582 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 REXO5Q96IC2 774 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF514Q96K75 400 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF347Q96SE7 839 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 EFCAB11Q9BUY7 163 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC6A16Q9GZN6 736 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ATAD3AQ9NVI7 634 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 TRPC4Q9UBN4 977 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 DNAJB9Q9UBS3 223 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 C2orf16Q68DN1 1984 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 A0A1W2PRB8 838 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 TRIM64BA6NI03 449 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 M0QX08 132 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 PTNP21246 168 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 EPHA2P29317 976 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 PXNP49023 591 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 GP2P55259 537 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 DMPKQ09013 629 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 PRSS53Q2L4Q9 553 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 PDZD3Q86UT5 571 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 ANKRD53Q8N9V6 530 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 REPS1Q96D71 796 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 EQTNQ9NQ60 294 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 GPC6Q9Y625 555 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 WDFY4Q6ZS81 3184 aa13.98□□□□□ -0.17
TRAFD1-201ENST00000257604 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 H0YAE9 185 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 C9P02748 559 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ACADLP28330 430 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PTPN6P29350 595 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SSR2P43308 183 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 RNF144AP50876 292 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 KCNC3Q14003 757 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 OXA1LQ15070 435 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC5A12Q1EHB4 618 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ADCK1Q86TW2 530 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SLC22A16Q86VW1 577 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 KRT78Q8N1N4 520 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 TESCQ96BS2 214 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 RHBGQ9H310 441 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 GPN2Q9H9Y4 310 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 FGF22Q9HCT0 170 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 GIN1Q9NXP7 522 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ERVK-18Q9QC07 812 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ARHGEF17Q96PE2 2063 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 HEATR5BQ9P2D3 2071 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 K7EQS6 105 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 VEGFDO43915 354 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 JRKO75564 520 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 POU1F1P28069 291 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 GSTM2P28161 218 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 DCTP40126 519 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ARHGDIAP52565 204 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 SF3B4Q15427 424 aaKnown RBP eCLIP13.97□□□□□ -0.175e-6■■■□□ 18.9
TRAFD1-201ENST00000257604 SPIN4Q56A73 249 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ATG9BQ674R7 924 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ZNF776Q68DI1 518 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 LAIR2Q6ISS4 152 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 PAGE2Q7Z2X7 111 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 WDR53Q7Z5U6 358 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 ZCCHC7Q8N3Z6 543 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 LINC01555Q8NAE3 123 aa13.97□□□□□ -0.17
TRAFD1-201ENST00000257604 CHTF18Q8WVB6 975 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms