RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 DEFB110Q30KQ9 67 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 XKR5Q6UX68 686 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 ERMP1Q7Z2K6 904 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 SARDHQ9UL12 918 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 KAT7O95251 611 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 PAQR7Q86WK9 346 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM25Q86YD3 366 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 DPH7Q9BTV6 452 aa17.98■□□□□ 0.47
SMARCC1-201ENST00000254480 IFT172Q9UG01 1749 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 HSPA12AO43301 675 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 PLEKHS1Q5SXH7 462 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 TREML1Q86YW5 311 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 NUP43Q8NFH3 380 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 CASTOR1Q8WTX7 329 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC22A4Q9H015 551 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 GSKIPQ9P0R6 139 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC22A1O15245 554 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 CSF2P04141 144 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SGCAQ16586 387 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SLC22A16Q86VW1 577 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 NPWQ8N729 165 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 NXPE2Q96DL1 559 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 C1orf74Q96LT6 269 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 NKX2-4Q9H2Z4 354 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 TAS2R9Q9NYW1 312 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 ENTPD6O75354 484 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 PIM1P11309 404 aaPredicted RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SNU13P55769 128 aaKnown RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 MAD2L1BPQ15013 274 aaPredicted RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 THOC7Q6I9Y2 204 aaKnown RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 TMEM80Q96HE8 168 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 MRM3Q9HC36 420 aaKnown RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 BAIAP2Q9UQB8 552 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 TEX46H3BTG2 121 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SNAP29O95721 258 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 SHMT2P34897 504 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 GINS1Q14691 196 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 INAVAQ3KP66 663 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 ASPGQ86U10 573 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 TRAV6A0A075B6T7 132 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 AURKAO14965 403 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 LRIT3Q3SXY7 679 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 ERMAPQ96PL5 475 aaPredicted RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 FUZQ9BT04 418 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 C5AR2Q9P296 337 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 AASSQ9UDR5 926 aa17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 PARP4Q9UKK3 1724 aaKnown RBP17.97■□□□□ 0.47
SMARCC1-201ENST00000254480 FAM227AF5H4B4 570 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 TGM5O43548 720 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NARSO43776 548 aaKnown RBP17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 C1GALT1C1LP0DN25 315 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 ATXN7L3Q14CW9 347 aaPredicted RBP17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 ELOCQ15369 112 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 DHCR24Q15392 516 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NKAPLQ5M9Q1 402 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NRROSQ86YC3 692 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 OR52B6Q8NGF0 335 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NSMAFQ92636 917 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 OR1F2PQ96R84 312 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 B3GAT2Q9NPZ5 323 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 TIGARQ9NQ88 270 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 HPF1Q9NWY4 346 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 KCPQ6ZWJ8 1503 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 SOCS2O14508 198 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 RAB36O95755 333 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 MSX1P28360 303 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 PMS2P3Q13401 168 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NFE2L1Q14494 772 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 OR4D1Q15615 310 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 GXYLT1Q4G148 440 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 SYCE2Q6PIF2 218 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 TIFABQ6ZNK6 161 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 ERI1Q8IV48 349 aaKnown RBP17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 SHKBP1Q8TBC3 707 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 BORCS6Q96GS4 357 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 LMO7Q8WWI1 1683 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 FAM221BA6H8Z2 402 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 MEN1O00255 615 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 APOC1P02654 83 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 NIPAL4Q0D2K0 466 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 MAPKAP1Q9BPZ7 522 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 TRIM64A6NGJ6 449 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 S1PR4O95977 384 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 FAM163BP0C2L3 166 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 UQCRC1P31930 480 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 UNC50Q53HI1 259 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 TECRLQ5HYJ1 363 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 KIAA1614Q5VZ46 1190 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 ZNF283Q8N7M2 679 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 POLE4Q9NR33 117 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 CSTAP01040 98 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 RFC2P35250 354 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 FXYD6P3P58550 94 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 DEFA5Q01523 94 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 SNTA1Q13424 505 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 MPP2Q14168 576 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 OCLNQ16625 522 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 CHST14Q8NCH0 376 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 OR8K5Q8NH50 307 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms