RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ERVK-6Q9BXR3 956 aa19.05■□□□□ 0.64
HOXC13-201ENST00000243056 IKZF5Q9H5V7 419 aa19.05■□□□□ 0.64
HOXC13-201ENST00000243056 ZFP64Q9NPA5 681 aa19.05■□□□□ 0.64
HOXC13-201ENST00000243056 NT5MQ9NPB1 228 aa19.05■□□□□ 0.64
HOXC13-201ENST00000243056 FAM234BA2RU67 622 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 WASH4PA8MWX3 477 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 F8W036 122 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 H3BM21 787 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 VIPP01282 170 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 NUDT6P53370 316 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 SLC7A9P82251 487 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 RAB30Q15771 203 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 TSTQ16762 297 aaKnown RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ESRP1Q6NXG1 681 aaKnown RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CEP76Q8TAP6 659 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 BTN2A2Q8WVV5 523 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 RBP7Q96R05 134 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 NPAS1Q99742 590 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CNPPD1Q9BV87 410 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ASPNQ9BXN1 380 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 BRINP2Q9C0B6 783 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 LDAHQ9H6V9 325 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 GPR83Q9NYM4 423 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 NLKQ9UBE8 527 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 SLC2A6Q9UGQ3 507 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CMAHPQ9Y471 501 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 A0A1B0GVM2 712 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CXCR6O00574 342 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 NPPAP01160 153 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 BTF3P20290 206 aaKnown RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 NUP62P37198 522 aaPredicted RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 HOXA1P49639 335 aaPredicted RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 RPP38P78345 283 aaKnown RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ITKQ08881 620 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ZNF648Q5T619 568 aaPredicted RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 RNF219Q5W0B1 726 aaPredicted RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CXorf57Q6NSI4 855 aaKnown RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 CORO6Q6QEF8 472 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 Q6ZPB1 254 aaPredicted RBP19.04■□□□□ 0.64
HOXC13-201ENST00000243056 SPATA19Q7Z5L4 167 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ZFAND4Q86XD8 727 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 SLC37A3Q8NCC5 494 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 PROKR1Q8TCW9 393 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 MIXL1Q9H2W2 232 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 TDP1Q9NUW8 608 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 RAB23Q9ULC3 237 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 ACSL5Q9ULC5 683 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 WNT6Q9Y6F9 365 aa19.04■□□□□ 0.64
HOXC13-201ENST00000243056 SLC22A23A1A5C7 686 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 CBX4O00257 560 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 MATN3O15232 486 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 CFDP00746 253 aaPredicted RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 FAM157BP0CG42 384 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 CLDN20P56880 219 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 HYAL1Q12794 435 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 SERINC3Q13530 473 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 COL28A1Q2UY09 1125 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 ATP6AP1LQ52LC2 224 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 SCIMPQ6UWF3 145 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 TMEM25Q86YD3 366 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 DNAJC22Q8N4W6 341 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 MYDGFQ969H8 173 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 RSPRY1Q96DX4 576 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 AHCYL2Q96HN2 611 aaKnown RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 PITX2Q99697 317 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 REG4Q9BYZ8 158 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 TMEM245Q9H330 911 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 UBQLN2Q9UHD9 624 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 DPP7Q9UHL4 492 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 MLYCDO95822 493 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 MRPL19P49406 292 aaKnown RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 BLVRAP53004 296 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 FLI1Q01543 452 aaPredicted RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 CDH17Q12864 832 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 ZNF169Q14929 603 aaPredicted RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 WSCD2Q2TBF2 565 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 C19orf48Q6RUI8 117 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 PTGR2Q8N8N7 351 aaPredicted RBP19.03■□□□□ 0.64
HOXC13-201ENST00000243056 OR6C4Q8NGE1 309 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 ASB12Q8WXK4 309 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 YIPF5Q969M3 257 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 OR5M11Q96RB7 305 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 ABCB9Q9NP78 766 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 VAPAQ9P0L0 249 aa19.03■□□□□ 0.64
HOXC13-201ENST00000243056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 A0A0A6YYJ9 748 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 hCG_1807616A0A1W2PRN6 198 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 WDPCPO95876 746 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 HOXD9P28356 352 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 ZNF177Q13360 481 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 GTF2H3Q13889 308 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 TMEM207Q6UWW9 146 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 CHMP1BQ7LBR1 199 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 SLC44A2Q8IWA5 706 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 FAM217AQ8IXS0 508 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 TSGA13Q96PP4 275 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 RANBP3Q9H6Z4 567 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 SNTG1Q9NSN8 517 aa19.02■□□□□ 0.64
HOXC13-201ENST00000243056 ZNF490Q9ULM2 529 aaPredicted RBP19.02■□□□□ 0.64
HOXC13-201ENST00000243056 NDRG2Q9UN36 371 aaKnown RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms