RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 TRIM39Q9HCM9 518 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 NDUFB11Q9NX14 153 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 MAP4K5Q9Y4K4 846 aa14.83□□□□□ -0.03
DDX55-201ENST00000238146 TRBC2A0A5B9 178 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 FHP07954 510 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 ATP1B2P14415 290 aaPredicted RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 MYL9P24844 172 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 CTGFP29279 349 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 TUFMP49411 452 aaKnown RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 SNRPGP62308 76 aaKnown RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 LRRC74AQ0VAA2 488 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 NAE1Q13564 534 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 ERAP2Q6P179 960 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 WDR53Q7Z5U6 358 aaPredicted RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 TRIM69Q86WT6 500 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 VWA5B2Q8N398 1253 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 CLP1Q92989 425 aaKnown RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 RIPOR3Q96MK2 946 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 POLR2J2Q9GZM3 115 aaKnown RBP14.83□□□□□ -0.04
DDX55-201ENST00000238146 TMEM161AQ9NX61 479 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 ATP6V1HQ9UI12 483 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 RAB23Q9ULC3 237 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 SNX11Q9Y5W9 270 aa14.83□□□□□ -0.04
DDX55-201ENST00000238146 ARRDC5A6NEK1 342 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 FAM25AB3EWG3 89 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 FAM25CB3EWG5 89 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 FAM25GB3EWG6 89 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 TPST2O60704 377 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 CDRT1O95170 752 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 IGFBP1P08833 259 aaPredicted RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 PCBP3P57721 371 aaKnown RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 CD83Q01151 205 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 KCNC3Q14003 757 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 NCF4Q15080 339 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SLC5A12Q1EHB4 618 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SPIN4Q56A73 249 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 RASGRP3Q8IV61 690 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 TAGAPQ8N103 731 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 OR5AK3PQ8NH89 298 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 GRPEL2Q8TAA5 225 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 UPF1Q92900 1129 aaKnown RBP eCLIP14.82□□□□□ -0.04
DDX55-201ENST00000238146 SLC25A46Q96AG3 418 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 CIDECQ96AQ7 238 aaPredicted RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 MED8Q96G25 268 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 REEP4Q9H6H4 257 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 RPRD1BQ9NQG5 326 aaKnown RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 ACOXLQ9NUZ1 547 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 FAM8A1Q9UBU6 413 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 REV1Q9UBZ9 1251 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 TRBV4-1A0A0J9YWV2 114 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 ARHGEF33A8MVX0 844 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 FFAR1O14842 300 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 PLD2O14939 933 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SEC14L5O43304 696 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 IGSF6O95976 241 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 GBAP04062 536 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 CSF2P04141 144 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 ALPPP05187 535 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 OR1D2P34982 312 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 RPS13P62277 151 aaKnown RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 VEPH1Q14D04 833 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 DUSP7Q16829 419 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 MPEG1Q2M385 716 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SLC35F1Q5T1Q4 408 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 LIPKQ5VXJ0 399 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 MEDAGQ5VYS4 303 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 TRIM40Q6P9F5 258 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 XKRXQ6PP77 449 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 AGTRAPQ6RW13 159 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 PAQR6Q6TCH4 344 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 TRIM48Q8IWZ4 208 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 PHC2Q8IXK0 858 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 OXR1Q8N573 874 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 NANOGP1Q8N7R0 232 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.82□□□□□ -0.044e-10■■■■■ 61.5
DDX55-201ENST00000238146 CREB3L4Q8TEY5 395 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 JPH3Q8WXH2 748 aaPredicted RBP14.82□□□□□ -0.04
DDX55-201ENST00000238146 SLC6A18Q96N87 628 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SAMD11Q96NU1 681 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 MND1Q9BWT6 205 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 CD84Q9UIB8 345 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 SSR3Q9UNL2 185 aa14.82□□□□□ -0.04
DDX55-201ENST00000238146 ERVH48-1M5A8F1 160 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 AGRPO00253 132 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 SOX14O95416 240 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 IFNA14P01570 189 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 NKX3-2P78367 333 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 HOXC5Q00444 222 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 MC1RQ01726 317 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 PLD1Q13393 1074 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 PUM1Q14671 1186 aaKnown RBP eCLIP14.81□□□□□ -0.045e-7■■■■■ 34.5
DDX55-201ENST00000238146 ZNF630Q2M218 657 aaPredicted RBP14.81□□□□□ -0.04
DDX55-201ENST00000238146 CCSMST1Q4G0I0 132 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 OTOP2Q7RTS6 562 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 BCDIN3DQ7Z5W3 292 aaKnown RBP14.81□□□□□ -0.04
DDX55-201ENST00000238146 BCL7CQ8WUZ0 217 aaPredicted RBP14.81□□□□□ -0.04
DDX55-201ENST00000238146 BTN2A2Q8WVV5 523 aa14.81□□□□□ -0.04
DDX55-201ENST00000238146 FOXJ1Q92949 421 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms