RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 OR4C11Q6IEV9 310 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SHISA6Q6ZSJ9 500 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 FRMD7Q6ZUT3 714 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 PRSS41Q7RTY9 318 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 PAGE2Q7Z2X7 111 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 HDXQ7Z353 690 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 VN1R5Q7Z5H4 357 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 C10orf107Q8IVU9 208 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ZC3H7AQ8IWR0 971 aaKnown RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 DTWD1Q8N5C7 304 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 GBP7Q8N8V2 638 aaPredicted RBP10.64□□□□□ -0.71
SF3B6-201ENST00000233468 PRR7Q8TB68 274 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 SELENOMQ8WWX9 145 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 PEX11GQ96HA9 241 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 F2RL3Q96RI0 385 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ING2Q9H160 280 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 EPN3Q9H201 632 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 BRF2Q9HAW0 419 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 LYRM4Q9HD34 91 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 KCNK9Q9NPC2 374 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 ATP13A2Q9NQ11 1180 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 KCNMB2Q9Y691 235 aa10.64□□□□□ -0.71
SF3B6-201ENST00000233468 TNRC6AQ8NDV7 1962 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 TEX15Q9BXT5 2789 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PRRC2CQ9Y520 2896 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ARHGAP10A1A4S6 786 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 MAGEB17A8MXT2 336 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 FFAR3O14843 346 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 GPR42O15529 346 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 TYROBPO43914 113 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PRMT3O60678 531 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 GUCY1B2O75343 617 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 SNUPNO95149 360 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 CHEK2O96017 543 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 HIST1H1TP22492 207 aaPredicted RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 RAB38P57729 211 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ACTN3Q08043 901 aaPredicted RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 AIMP2Q13155 320 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 KCNAB2Q13303 367 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ATP1A4Q13733 1029 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 SYT16Q17RD7 645 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 DCAF10Q5QP82 559 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 LETMD1Q6P1Q0 360 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 CYP20A1Q6UW02 462 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 QSOX2Q6ZRP7 698 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 NDUFAF7Q7L592 441 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PPP1R32Q7Z5V6 425 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 EXOC3L1Q86VI1 746 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 NUDT13Q86X67 352 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF595Q8IYB9 648 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 CA13Q8N1Q1 262 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 CDYL2Q8N8U2 506 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PLPP5Q8NEB5 264 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PPP1R14CQ8TAE6 165 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 OR51B5Q9H339 312 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 MID1IP1Q9NPA3 183 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PRDM7Q9NQW5 492 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF71Q9NQZ8 489 aaPredicted RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 RIC8BQ9NVN3 520 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 LYARQ9NX58 379 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PHF11Q9UIL8 331 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 MMACHCQ9Y4U1 282 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 PCDHGB7Q9Y5F8 929 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 HS3ST3B1Q9Y662 390 aa10.63□□□□□ -0.71
SF3B6-201ENST00000233468 SPENQ96T58 3664 aaKnown RBP10.63□□□□□ -0.71
SF3B6-201ENST00000233468 USP9YO00507 2555 aaPredicted RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 USP9XQ93008 2570 aaPredicted RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NSG1A0A0A6YYJ2 146 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 SOCS6O14544 535 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 BIRC5O15392 142 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NPHS1O60500 1241 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 B4GALT2O60909 372 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 OR4F21O95013 312 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 SCELO95171 688 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 TBX6O95947 436 aaPredicted RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 HPP00738 406 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ALPPP05187 535 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 FURINP09958 794 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NEFHP12036 1026 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 TSPAN8P19075 237 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ATP5A1P25705 553 aaKnown RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 PPP2R1BP30154 601 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 BUD31P41223 144 aaPredicted RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 CCL11P51671 97 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NEK2P51955 445 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 HSD17B7P56937 341 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 OLR1P78380 273 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 GALNT1Q10472 559 aaPredicted RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 CSTF3Q12996 717 aaKnown RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 BIKQ13323 160 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 PCLAFQ15004 111 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NSDHLQ15738 373 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 SGO1Q5FBB7 561 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 TNFAIP8L3Q5GJ75 292 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 FAM69BQ5VUD6 431 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ADNP2Q6IQ32 1131 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 TMEM205Q6UW68 189 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 KIRREL2Q6UWL6 708 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 RPS27LQ71UM5 84 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms