RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 THRSPQ92748 146 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 NPY6RQ99463 290 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 FLRT2O43155 660 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 MPP2Q14168 576 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LIPJQ5W064 366 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 POGLUT1Q8NBL1 392 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 KCNJ9Q92806 393 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 RBCK1Q9BYM8 510 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 PCDHGA2Q9Y5H1 932 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LMO7Q8WWI1 1683 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 C2orf74A8MZ97 194 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LRRN3E7EW58 273 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 AURKAO14965 403 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LCN1P31025 176 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 RGS19P49795 217 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LRIF1Q5T3J3 769 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 NIPAL1Q6NVV3 410 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 CASTOR1Q8WTX7 329 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 FCRL3Q96P31 734 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LRRN3Q9H3W5 708 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 PRTFDC1Q9NRG1 225 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 ACSL5Q9ULC5 683 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 FGF3P11487 239 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-201ENST00000230538 PFKLP17858 780 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 RNF144AP50876 292 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-201ENST00000230538 PMS2P3Q13401 168 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 LY6G5CQ5SRR4 150 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 TRIM74Q86UV6 250 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 ZSWIM9Q86XI8 627 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 TIGD4Q8IY51 512 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF283Q8N7M2 679 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 OR8K3Q8NH51 312 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 MMABQ96EY8 250 aaPredicted RBP11.13□□□□□ -0.63
LAMA4-201ENST00000230538 PSAT1Q9Y617 370 aa11.13□□□□□ -0.63
LAMA4-201ENST00000230538 C11orf98E9PRG8 122 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 H7BY64 318 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 DLGAP1O14490 977 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 AOC2O75106 756 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 OR12D1P0DN82 309 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 RFC2P35250 354 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 VSX2P58304 361 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 WDR45BQ5MNZ6 344 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 MEDAGQ5VYS4 303 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZDHHC14Q8IZN3 488 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PRAP1Q96NZ9 151 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 CLIC3O95833 236 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 GALTP07902 379 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 CCDC116Q8IYX3 515 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 OR51G2Q8NGK0 314 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 OR5J2Q8NH18 312 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 SLC22A8Q8TCC7 542 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PLEKHO2Q8TD55 490 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 DDX1Q92499 740 aaKnown RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 KLHDC7BQ96G42 594 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 OARD1Q9Y530 152 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 NFS1Q9Y697 457 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 TRAV6A0A075B6T7 132 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ISPDA4D126 451 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 SYNGR4O95473 234 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 MAGEA11P43364 429 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PER3P56645 1201 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 INCA1Q0VD86 236 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ARSKQ6UWY0 536 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 TXNDC5Q8NBS9 432 aaKnown RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF461Q8TAF7 563 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF675Q8TD23 568 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 TUBA1CQ9BQE3 449 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 G6PC3Q9BUM1 346 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 HCN2Q9UL51 889 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 TCHHQ07283 1943 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 CCRL2O00421 344 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF821O75541 412 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PDYNP01213 254 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ANXA3P12429 323 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 MAGEA8P43361 318 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 RHEBQ15382 184 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 UGT8Q16880 541 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF648Q5T619 568 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 CARM1Q86X55 608 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PSD4Q8NDX1 1056 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF382Q96SR6 550 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 HRASLS2Q9NWW9 162 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 SOCS5O75159 536 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 SOD2P04179 222 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 GABRA3P34903 492 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 MAP2K4P45985 399 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 MOGQ16653 247 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 GLT8D1Q68CQ7 371 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 TMEM225Q6GV28 225 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 C14orf80Q86SX3 495 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 ASB12Q8WXK4 309 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 BEX2Q9BXY8 128 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 BEX1Q9HBH7 125 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 PRODH2Q9UF12 536 aa11.12□□□□□ -0.63
LAMA4-201ENST00000230538 FAM221BA6H8Z2 402 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms