RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PCDHB14Q9Y5E9 798 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 C13orf42A0A1B0GVH6 325 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 A0A1W2PQ09 198 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ARL5CA6NH57 179 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ELOA3DA6NLF2 546 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ITGAMP11215 1152 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NT5EP21589 574 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 KCNA5P22460 613 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RPS5P46782 204 aaKnown RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ELOA3BQ3SY89 546 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 KLHL26Q53HC5 615 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NHSL2Q5HYW2 709 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ISCA2Q86U28 154 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 THOC6Q86W42 341 aaKnown RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ELOA3Q8NG57 546 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GNPDA2Q8TDQ7 276 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 GSTO2Q9H4Y5 243 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PADI2Q9Y2J8 665 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 F5H0A9 414 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FGF4P08620 206 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ACADMP11310 421 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 FDXRP22570 491 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PPM1AP35813 382 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 ZNF155Q12901 538 aaPredicted RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 SF1Q15637 639 aaKnown RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 LHFPL3Q86UP9 236 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 RHBDF1Q96CC6 855 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 TXNDC15Q96J42 360 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 METTL8Q9H825 291 aaKnown RBP13.3□□□□□ -0.28
HCFC2-201ENST00000229330 NDUFAF4Q9P032 175 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
HCFC2-201ENST00000229330 CD8B2A6NJW9 211 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 STBD1O95210 358 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 IL3P08700 152 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 CD8BP10966 210 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 TMEM220Q6QAJ8 160 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ARSKQ6UWY0 536 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ZNF227Q86WZ6 799 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 OR51G2Q8NGK0 314 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 GRK5P34947 590 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ACVRL1P37023 503 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 MAP3K8P41279 467 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 SF3A2Q15428 464 aaKnown RBP13.29□□□□□ -0.28
HCFC2-201ENST00000229330 CCDC58Q4VC31 144 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 STEAP3Q658P3 488 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 B3GNT8Q7Z7M8 397 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 SLC5A8Q8N695 610 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 TMEM45AQ9NWC5 275 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 LTBP3Q9NS15 1303 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 TNFSF8P32971 234 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 AIMP2Q13155 320 aaKnown RBP13.29□□□□□ -0.28
HCFC2-201ENST00000229330 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 OR2L5Q8NG80 312 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 PFDN5Q99471 154 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 DPH2Q9BQC3 489 aaPredicted RBP13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ASB4Q9Y574 426 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ANKRD66B4E2M5 251 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 OR3A3P47888 321 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 OR3A2P47893 321 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 NRIP1P48552 1158 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 MC1RQ01726 317 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 CCL14Q16627 93 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ZCCHC12Q6PEW1 402 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 CEACAM19Q7Z692 300 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 NR4A3Q92570 626 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 ERVW-1Q9UQF0 538 aa13.29□□□□□ -0.28
HCFC2-201ENST00000229330 DUXAA6NLW8 204 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ALPIP09923 528 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ITPKBP27987 946 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 MLLT10P55197 1068 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GRSF1Q12849 480 aaKnown RBP eCLIP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CHRNA6Q15825 494 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CNIH2Q6PI25 160 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 LARP4Q71RC2 724 aaKnown RBP eCLIP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 NUDT13Q86X67 352 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 CLDN19Q8N6F1 224 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 PEX13Q92968 403 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 HDHD5Q9BXW7 423 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SCP2D1Q9UJQ7 156 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 MED31Q9Y3C7 131 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 ZNF705EA8MWA4 302 aaPredicted RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 NUPL2O15504 423 aaKnown RBP13.28□□□□□ -0.28
HCFC2-201ENST00000229330 OR1I1O60431 355 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 SEC14L2O76054 403 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 EPOP01588 193 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 GRK6P43250 576 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 PGDP52209 483 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 PRKCZQ05513 592 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 TOR1AIP1Q5JTV8 583 aa13.28□□□□□ -0.28
HCFC2-201ENST00000229330 NRARPQ7Z6K4 114 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms