RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FUT4P22083 530 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 EIF5AP63241 154 aaKnown RBP18.23■□□□□ 0.51
SMPD3-201ENST00000219334 HTRA3P83110 453 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PACRGLQ8N7B6 248 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 NAT14Q8WUY8 206 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 IL17FQ96PD4 163 aa18.23■□□□□ 0.51
SMPD3-201ENST00000219334 PLD2O14939 933 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 SDC3O75056 442 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 HLA-DPB1P04440 258 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 IL3P08700 152 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 OTX2P32243 289 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 SLC18A2Q05940 514 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 LPAL2Q16609 132 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF613Q6PF04 617 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 RPS27LQ71UM5 84 aaKnown RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 OR9I1Q8NGQ6 314 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 HSD3B7Q9H2F3 369 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 C11orf98E9PRG8 122 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 P04436 131 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 C8BP07358 591 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ADRB3P13945 408 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 MECP2P51608 486 aaKnown RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 OR2B6P58173 313 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 PITX1P78337 314 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 PRKCDQ05655 676 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 GBX1Q14549 363 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 C4orf46Q504U0 113 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TCTE1Q5JU00 501 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 MORN1Q5T089 497 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 OR52E8Q6IFG1 317 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 LRRC25Q8N386 305 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 OR10Q1Q8NGQ4 319 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 GNPDA2Q8TDQ7 276 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ITGB1BP2Q9UKP3 347 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 MGAT4BQ9UQ53 548 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 LIPT1Q9Y234 373 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 HCN4Q9Y3Q4 1203 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 H3BUI4 141 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 H6PDO95479 791 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 XRCC1P18887 633 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TIA1P31483 386 aaKnown RBP eCLIP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 SGCAQ16586 387 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 UNQ6126/PRO20091Q6UXV3 157 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TCEAL8Q8IYN2 117 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ANKLE1Q8NAG6 615 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 STON2Q8WXE9 905 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 K7ERQ8 282 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 NUAK1O60285 661 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 HNRNPA2B1P22626 353 aaKnown RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ODF4Q2M2E3 257 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 PRAMEF17Q5VTA0 474 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF227Q86WZ6 799 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 NAA11Q9BSU3 229 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-201ENST00000219334 PGCP20142 388 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 C1orf189Q5VU69 101 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF611Q8N823 705 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 RHBDD1Q8TEB9 315 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TMEM203Q969S6 136 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TMEM74Q96NL1 305 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 LPAR4Q99677 370 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 TMEM184CQ9NVA4 438 aa18.22■□□□□ 0.51
SMPD3-201ENST00000219334 DUOX1Q9NRD9 1551 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 ACOX3O15254 700 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 SOX14O95416 240 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 EPCAMP16422 314 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 TMEM35AQ53FP2 167 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF782Q6ZMW2 699 aaPredicted RBP18.21■□□□□ 0.51
SMPD3-201ENST00000219334 CEP76Q8TAP6 659 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 NSMAFQ92636 917 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 GAL3ST3Q96A11 431 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 GDE1Q9NZC3 331 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 OR12D1P0DN82 309 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 CD70P32970 193 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 TAS2R43P59537 309 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 OR6N2Q8NGY6 317 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 ZBTB26Q9HCK0 441 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 SLC7A8Q9UHI5 535 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 MAFKO60675 156 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 ZNF821O75541 412 aaPredicted RBP18.21■□□□□ 0.51
SMPD3-201ENST00000219334 DIRAS1O95057 198 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 SLC35F1Q5T1Q4 408 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 SMYD5Q6GMV2 418 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 FANK1Q8TC84 345 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 PPP1R8Q12972 351 aaKnown RBP18.21■□□□□ 0.51
SMPD3-201ENST00000219334 NNATQ16517 81 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 NCEH1Q6PIU2 408 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 RANBP9Q96S59 729 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 OR51I1Q9H343 314 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 RPF2Q9H7B2 306 aaKnown RBP18.21■□□□□ 0.51
SMPD3-201ENST00000219334 OR1A2Q9Y585 309 aa18.21■□□□□ 0.51
SMPD3-201ENST00000219334 HOXA11P31270 313 aaPredicted RBP18.2■□□□□ 0.5
SMPD3-201ENST00000219334 MRPL10Q7Z7H8 261 aaKnown RBP18.2■□□□□ 0.5
SMPD3-201ENST00000219334 TMED9Q9BVK6 235 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 KCNK13Q9HB14 408 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 ENY2Q9NPA8 101 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 AASSQ9UDR5 926 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 SCGB2B2Q4G0G5 96 aa18.2■□□□□ 0.5
SMPD3-201ENST00000219334 UBQLNLQ8IYU4 475 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms