RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SOX2P48431 317 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 ARHGDIBP52566 201 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 SIM1P81133 766 aaPredicted RBP18.1■□□□□ 0.49
MBD3-201ENST00000156825 DEFB110Q30KQ9 67 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 TNFAIP8L3Q5GJ75 292 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 ZFAND4Q86XD8 727 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 C9orf43Q8TAL5 461 aaPredicted RBP18.1■□□□□ 0.49
MBD3-201ENST00000156825 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.1■□□□□ 0.49
MBD3-201ENST00000156825 ADAMTS6Q9UKP5 1117 aa18.1■□□□□ 0.49
MBD3-201ENST00000156825 HNRNPA1P09651 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
MBD3-201ENST00000156825 CASRP41180 1078 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 TCEAL6Q6IPX3 200 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 NUP43Q8NFH3 380 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 FUBP1Q96AE4 644 aaKnown RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 EPYCQ99645 322 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 PTPRZ1P23471 2315 aaPredicted RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 A0A1W2PPK0 400 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MBLAC1A4D2B0 266 aaPredicted RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 ITGA10O75578 1167 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 ACADVLP49748 655 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 SCGB2B2Q4G0G5 96 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MARCH8Q5T0T0 291 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 FIGNL1Q6PIW4 674 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 C12orf43Q96C57 262 aaKnown RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 FAM83CQ9BQN1 747 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 BEX2Q9BXY8 128 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 BEX1Q9HBH7 125 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 WDR6Q9NNW5 1121 aaKnown RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 M0QZQ0 153 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 PUDPQ08623 228 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 QSOX2Q6ZRP7 698 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 NRROSQ86YC3 692 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MR1Q95460 341 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MAL2Q969L2 176 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MYH7P12883 1935 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 NPIPB15A6NHN6 443 aaPredicted RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 PDCD5O14737 125 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 UQCRC2P22695 453 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 KDELR2P33947 212 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 POU6F2P78424 691 aaPredicted RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 ULK3Q6PHR2 472 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 DENND1AQ8TEH3 1009 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 TMCO6Q96DC7 493 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 APOBEC3BQ9UH17 382 aaKnown RBP18.09■□□□□ 0.49
MBD3-201ENST00000156825 PCDHGA3Q9Y5H0 932 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 PIAS3Q9Y6X2 628 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 BRWD1Q9NSI6 2320 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 A0A1W2PRG6 482 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 PROM1O43490 865 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 SOX30O94993 753 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 JUPP14923 745 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 ERVPABLB-1P60509 514 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 KLHL26Q53HC5 615 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 AMIGO1Q86WK6 493 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 MEAF6Q9HAF1 191 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 IL26Q9NPH9 171 aa18.09■□□□□ 0.49
MBD3-201ENST00000156825 ZNF821O75541 412 aaPredicted RBP18.08■□□□□ 0.49
MBD3-201ENST00000156825 C4orf46Q504U0 113 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 STEAP4Q687X5 459 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 ZNF551Q7Z340 670 aaPredicted RBP18.08■□□□□ 0.49
MBD3-201ENST00000156825 P4HA3Q7Z4N8 544 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.08■□□□□ 0.49
MBD3-201ENST00000156825 PEX13Q92968 403 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 RAB7BQ96AH8 199 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 LRIG1Q96JA1 1093 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 TMEM165Q9HC07 324 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 DZANK1Q9NVP4 752 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 GRHPRQ9UBQ7 328 aa18.08■□□□□ 0.49
MBD3-201ENST00000156825 ETFAP13804 333 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 TRAM2Q15035 370 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 ELOCQ15369 112 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 GTDC1Q4AE62 458 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 WDR45BQ5MNZ6 344 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 DTX3Q8N9I9 347 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 TRIM36Q9NQ86 728 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 PEX12O00623 359 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 HEXBP07686 556 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 CELP19835 753 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 TNFRSF1BP20333 461 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 MAP2K4P45985 399 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 IST1P53990 364 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 ADAM17P78536 824 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 KCNC4Q03721 635 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 ANKDD1AQ495B1 522 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 CES4AQ5XG92 561 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 SHQ1Q6PI26 577 aaKnown RBP18.08■□□□□ 0.48
MBD3-201ENST00000156825 KBTBD6Q86V97 674 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 SCRN2Q96FV2 425 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 MAFFQ9ULX9 164 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 MUSKO15146 869 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 RNF13O43567 381 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 ZNF182P17025 639 aaPredicted RBP18.08■□□□□ 0.48
MBD3-201ENST00000156825 C1orf189Q5VU69 101 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 VTCN1Q7Z7D3 282 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 PIANPQ8IYJ0 282 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 ZNF689Q96CS4 500 aaPredicted RBP18.08■□□□□ 0.48
MBD3-201ENST00000156825 MND1Q9BWT6 205 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 LRRC42Q9Y546 428 aa18.08■□□□□ 0.48
MBD3-201ENST00000156825 E7EQ34 232 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 JMJD7P0C870 316 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms