RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 OR1A2Q9Y585 309 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
CTNS-201ENST00000046640 IGLON5A6NGN9 336 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 M0QX08 132 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PRMT3O60678 531 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 SERPIND1P05546 499 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 IL3P08700 152 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 STSP08842 583 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ITGB7P26010 798 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PTGER1P34995 402 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 CHI3L1P36222 383 aaPredicted RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 ASMTP46597 345 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PNLIPRP1P54315 467 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ETFBKMTQ8IXQ9 262 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 RHOXF1Q8NHV9 184 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 IGFLR1Q9H665 355 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 REEP4Q9H6H4 257 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 RLIMQ9NVW2 624 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 NDRG4Q9ULP0 352 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 SLC6A14Q9UN76 642 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 MTCL1Q9Y4B5 1905 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 PLXNA2O75051 1894 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 OR2A25A4D2G3 310 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 NPIPB8E9PQR5 432 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 SNPHO15079 494 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 CA3P07451 260 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 JUNDP17535 347 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 KCNJ10P78508 379 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 MADCAM1Q13477 382 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ELAVL3Q14576 367 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 BCL2A1Q16548 175 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 TIGD6Q17RP2 521 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 SLC5A12Q1EHB4 618 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 HIST2H2AA3Q6FI13 130 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 NXPE4Q6UWF7 544 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 LYSMD2Q8IV50 215 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 CCDC103Q8IW40 242 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 NRSN1Q8IZ57 195 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 CXorf40AQ8TE69 158 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 C16orf78Q8WTQ4 265 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 FGF13Q92913 245 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ZNF566Q969W8 418 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 MAGEB10Q96LZ2 347 aaPredicted RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 FBXO8Q9NRD0 319 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 WASHC1A8K0Z3 465 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 KLHL18O94889 574 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 HNRNPA1P09651 372 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTNS-201ENST00000046640 ALOX5P09917 674 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 P2RY2P41231 377 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PPP5CP53041 499 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PPIGQ13427 754 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTNS-201ENST00000046640 KEAP1Q14145 624 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 GANABQ14697 944 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 ZNF404Q494X3 552 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ZC3H12BQ5HYM0 836 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 ATAD3BQ5T9A4 648 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ERICH5Q6P6B1 374 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 WASH2PQ6VEQ5 465 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 C11orf96Q7Z7L8 435 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 NLGN4XQ8N0W4 816 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 C11orf65Q8NCR3 313 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PHF10Q8WUB8 498 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 SUSD6Q92537 303 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 TFGQ92734 400 aaPredicted RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 F2RL3Q96RI0 385 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 FEVQ99581 238 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 MACROD1Q9BQ69 325 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ITPAQ9BY32 194 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ZCCHC2Q9C0B9 1178 aaKnown RBP12.55□□□□□ -0.4
CTNS-201ENST00000046640 OSGEPL1Q9H4B0 414 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 ADPRHL2Q9NX46 363 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
CTNS-201ENST00000046640 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 SERTM1A2A2V5 107 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 TMEM229AB2RXF0 380 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 H7BY64 318 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 M0R082 166 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 CYP7B1O75881 506 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PAPLNO95428 1278 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ACVR2AP27037 513 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 CDH12P55289 794 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ZNF658BQ4V348 819 aaPredicted RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 ANXA8L1Q5VT79 327 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 TMIGD1Q6UXZ0 262 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 MSANTD1Q6ZTZ1 278 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 PRSS48Q7RTY5 328 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 TSPYL5Q86VY4 417 aaPredicted RBP12.54□□□□□ -0.4
CTNS-201ENST00000046640 FBLIM1Q8WUP2 373 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 UCN3Q969E3 161 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 COQ8BQ96D53 544 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 C7orf34Q96L11 122 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 KCNS3Q9BQ31 491 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 MIEF1Q9NQG6 463 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 QPCTLQ9NXS2 382 aa12.54□□□□□ -0.4
CTNS-201ENST00000046640 ANKMY1Q9P2S6 941 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms