RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 THAP10Q9P2Z0 257 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 HCN4Q9Y3Q4 1203 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 A0A096LPI6 279 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 A0A1W2PRG6 482 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CSTAP01040 98 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 PRSS56P0CW18 603 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 BCKDHAP12694 445 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 FAUP35544 74 aaKnown RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ZNF140P52738 457 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SMSP52788 366 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SERTAD2Q14140 314 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 IQCCQ4KMZ1 466 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 LIN54Q6MZP7 749 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 KLHL17Q6TDP4 642 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 USP30Q70CQ3 517 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 RAB8BQ92930 207 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 FUBP1Q96AE4 644 aaKnown RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SERINC2Q96SA4 455 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 MTMR10Q9NXD2 777 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 NLGN3Q9NZ94 848 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 MAU2Q9Y6X3 613 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 OR52A4PA6NMU1 304 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ACOT7O00154 380 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 UGDHO60701 494 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 P04436 131 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 HSD11B1P28845 292 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CLEC12AQ5QGZ9 265 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 HORMAD2Q8N7B1 307 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 OR2A12Q8NGT7 310 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 OR56A3Q8NH54 315 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 THAP3Q8WTV1 239 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 TP53INP1Q96A56 240 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 HSH2DQ96JZ2 352 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 PBX4Q9BYU1 374 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ACTR3BQ9P1U1 418 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 BTBD3Q9Y2F9 522 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SCO2O43819 266 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 NOBOXO60393 691 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 GPR37L1O60883 481 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CTHP32929 405 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SHC2P98077 582 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 RBBP4Q09028 425 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ABRAXAS2Q15018 415 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 TRAM2Q15035 370 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 MYLIPQ8WY64 445 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 MCHR1Q99705 422 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 OR6C2Q9NZP2 312 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 GIMAP2Q9UG22 337 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 EFCAB9A8MZ26 197 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC6A9P48067 706 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 VLDLRP98155 873 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CTBSQ01459 385 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 KCNC4Q03721 635 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 NPTX1Q15818 432 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CTC1Q2NKJ3 1217 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 DEFB110Q30KQ9 67 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CYBRD1Q53TN4 286 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 METTL2BQ6P1Q9 378 aaKnown RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CD200R1Q8TD46 325 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ZSWIM3Q96MP5 696 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 ASB16Q96NS5 453 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC22A12Q96S37 553 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC39A3Q9BRY0 314 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 PITHD1Q9GZP4 211 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CXCL16Q9H2A7 254 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CLEC4MQ9H2X3 399 aaPredicted RBP9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 CENPMQ9NSP4 180 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 GRHPRQ9UBQ7 328 aa9.93□□□□□ -0.82
NIPAL3-201ENST00000003912 C9P02748 559 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 OR12D1P0DN82 309 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 ZNF20P17024 532 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC6A6P31641 620 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 AFF3P51826 1226 aaKnown RBP9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 GBX2P52951 348 aaPredicted RBP9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 DIO3P55073 304 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 RPS3AP61247 264 aaKnown RBP9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 DAG1Q14118 895 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 C6orf52Q5T4I8 152 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 ABHD17BQ5VST6 288 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 PARM1Q6UWI2 310 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 CEP76Q8TAP6 659 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 UCK2Q9BZX2 261 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 MEAF6Q9HAF1 191 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 LRIT1Q9P2V4 623 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 CPNE7Q9UBL6 633 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 RSL24D1Q9UHA3 163 aaKnown RBP9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 MYH9P35579 1960 aaKnown RBP9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 IFNA6P05013 189 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 F3P13726 295 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 HSF2Q03933 536 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 SLC5A9Q2M3M2 681 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 TRIM73Q86UV7 250 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 DENND6BQ8NEG7 585 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 OR8J3Q8NGG0 315 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 COX4I2Q96KJ9 171 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 HDAC8Q9BY41 377 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 ARNT2Q9HBZ2 717 aa9.92□□□□□ -0.82
NIPAL3-201ENST00000003912 NKIRAS2Q9NYR9 191 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms