RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Cars2Q8BYM8 551 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gin1Q8K259 518 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Atat1Q8K341 421 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Isoc1Q91V64 297 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cts7Q91ZF2 331 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 H2bfmQ9DAB5 224 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tmem8aQ9ESN3 769 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gdf2Q9WV56 428 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Dock6Q8VDR9 2080 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Jbts17Q8CE72 3214 aa15.18■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cylc1A0A1B0GR13 642 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm5938A2AEN9 163 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm5475D3YV11 175 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Srp54bE9PXC0 504 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm8922F6XVS9 199 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Vmn2r31L7N1Z4 861 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nckap1P28660 1128 aaKnown RBP15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 IduaP48441 634 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pcgf5Q3UK78 256 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Nr0b2Q62227 260 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 CrebzfQ91ZR3 358 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Clvs1Q9D4C9 354 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Wdr53Q9DB94 358 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Aif1lQ9EQX4 150 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cep290Q6A078 2472 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Klhl4B1AZR0 717 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Dsg2O55111 1122 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ly6aP05533 134 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Kcnab2P62482 367 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rad51Q08297 339 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tmem248Q3TBN1 314 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 SctrQ5FWI2 447 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 KdsrQ6GV12 332 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Olfr1252Q7TQZ2 314 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Hmbox1Q8BJA3 419 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Atp6v1hQ8BVE3 483 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Lats1Q8BYR2 1129 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cyp4f3Q99N16 524 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mri1Q9CQT1 369 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Sppl2aQ9JJF9 523 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rai1Q61818 1889 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Igkv6-20A0A140T8P2 115 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm4869A0A1B0GSG7 984 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm5861F6VCN9 180 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 4933402N22RikF7D1B3 190 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gpx5P21765 221 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Carnmt1Q80UY1 400 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pgs1Q8BHF7 553 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ap5m1Q8BJ63 490 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Poglut1Q8BYB9 392 aaKnown RBP15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cd209aQ91ZX1 238 aa15.17■□□□□ 0.02
Trim39-203ENSMUST00000113706 PtprsB0V2N1 1907 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fer1l5P0DM40 2038 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Serpina3jD3Z451 420 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Arl9F7BE40 171 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Zfp934K7N6H3 473 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 UoxP25688 303 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rab23P35288 237 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Lefty2P57785 368 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 NfycP70353 335 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Krt72Q6IME9 520 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fbxo42Q6PDJ6 717 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Mapre3Q6PER3 281 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 GnptgQ6S5C2 307 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rap2aQ80ZJ1 183 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rbm4Q8C7Q4 361 aaKnown RBP15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Oard1Q8R5F3 152 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Rbm4bQ8VE92 357 aaKnown RBP15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 NplQ9DCJ9 320 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ndrg2Q9QYG0 371 aaKnown RBP15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Unc13cQ8K0T7 2210 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Pkd2l1A2A259 760 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm8879F6R3J9 157 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Lgals7O54974 136 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc6a12P31651 614 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ubfd1Q78JW9 368 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Trim23Q8BGX0 574 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Utp4Q8R2N2 686 aaKnown RBP15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 NvlQ9DBY8 855 aaKnown RBP15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Hacl1Q9QXE0 581 aa15.16■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ect2lA0A140LIP2 953 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Adh6bA0A1D5RMB0 384 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Zfp600A2A7V0 737 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Enthd1E9Q1Z2 618 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 DdcO88533 480 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 H2-Q7P14429 334 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 H2-Q9P14431 200 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Cldn34b4Q3V0X2 211 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Tbccd1Q640P7 552 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Fbxo30Q8BJL1 746 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Ugt2b35Q8BJL9 529 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Klf8Q8BLM0 355 aaKnown RBP15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Slc49a3Q8CE47 516 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 BicralQ8CHH5 1074 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Dusp15Q8R4V2 235 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Apbb2Q9DBR4 760 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 DptQ9QZZ6 201 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Scgb2b17S4R2V3 82 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Wdfy3Q6VNB8 3508 aa15.15■□□□□ 0.02
Trim39-203ENSMUST00000113706 Gm14147A2AQX6 640 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms