RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Barhl2Q8VIB5 384 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Acsl6Q91WC3 697 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ms4a6dQ99N07 247 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ankra2Q99PE2 312 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mrpl49Q9CQ40 166 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ovca2Q9D7E3 225 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 RtcAQ9D7H3 366 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 SrrQ9QZX7 339 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Znf106O88466 1888 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Alpk2Q91ZB0 2144 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 LctF8VPT3 1931 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp982A2A8Q4 368 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Pdzd8B9EJ80 1147 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 C6E9Q6D8 931 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr743L7N1Y2 311 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 AmbnO55189 407 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Cst3P21460 140 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 TecP24604 630 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Sat1P48026 171 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rps14P62264 151 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Tbx4P70325 552 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 UrodP70697 367 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 SPINDOCQ05AH6 381 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 PomkQ3TUA9 349 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Glt8d2Q640P4 349 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr1046Q7TR79 316 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr169Q7TS53 313 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mib1Q80SY4 1006 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 LppQ8BFW7 613 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ppm1fQ8CGA0 452 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Wdr47Q8CGF6 920 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 HnrnplQ8R081 586 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Fam129bQ8R1F1 749 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ptgr2Q8VDQ1 351 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr1263Q8VG63 306 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr532Q8VGT4 309 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Clstn3Q99JH7 956 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 EtfaQ99LC5 333 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Atp5f1Q9CQQ7 256 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 OoepQ9CWE6 164 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Arl5bQ9D4P0 179 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Exosc8Q9D753 276 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Trip4Q9QXN3 581 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 FaimQ9WUD8 179 aa7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Numa1E9Q7G0 2094 aaKnown RBP7.97□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm7697A0A0J9YUH2 350 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm9495A0A0J9YUZ3 350 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp600A2A7V0 737 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zfp964B2RR88 472 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 ChadO55226 358 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Dhcr7O88455 471 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gdf7P43029 461 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Mapkapk2P49138 386 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gabrr2P56476 465 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 AbatP61922 500 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Timm13P62075 95 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rgs14P97492 547 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 VldlrP98156 873 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ptpn2Q06180 406 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Usp39Q3TIX9 564 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Gm10696Q3UTC4 357 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Cdkn2cQ60772 168 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Ca4Q64444 305 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Dennd5aQ6PAL8 1287 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Igsf5Q7TSN7 370 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Galnt12Q8BGT9 576 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Adgrg1Q8K209 687 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Slc29a4Q8R139 528 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Vmn1r6Q8R2D4 303 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Chrna3Q8R4G9 499 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Nle1Q8VEJ4 485 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr450Q8VF81 310 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Olfr371Q8VGB8 312 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Rab14Q91V41 215 aaKnown RBP7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Themis3Q9CU24 569 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Elovl2Q9JLJ4 292 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Zbp1Q9QY24 411 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Plin4O88492 1403 aa7.96□□□□□ -1.13
Cdc40-201ENSMUST00000044166 Igkv5-43A0A0B4J1J2 115 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 6720489N17RikA0A1Y7VJW0 127 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Gm4450E9Q007 373 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rgs4O08899 205 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cyp21P03940 487 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 P06324 132 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 StsP50427 624 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Atp6v1e1P50518 226 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Pcp4P63054 62 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Rps5P97461 204 aaKnown RBP7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 IdsQ08890 552 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Adam2Q60718 735 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Hsd3b4Q61767 373 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 MyorgQ69ZQ1 716 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Trim45Q6PFY8 580 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 NarflQ7TMW6 476 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Trmt61aQ80XC2 290 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Cd99l2Q8BIF0 237 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Chpt1Q8C025 398 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Dnajc27Q8CFP6 273 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Ifnl3Q8CGK6 193 aa7.96□□□□□ -1.14
Cdc40-201ENSMUST00000044166 Abhd4Q8VD66 342 aa7.96□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms