RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Pik3c2aQ61194 1686 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp963D3Z2T8 383 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Znf354aQ61751 572 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Sox19Q62249 55 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Vat1Q62465 406 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pi4k2bQ8CBQ5 469 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 CrtapQ9CYD3 400 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Yipf5Q9EQQ2 257 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 PrelpQ9JK53 378 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 2610001J05RikF2Z3Y9 59 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1022L7MTT3 315 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rps17P63276 135 aaKnown RBP16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Yy2Q3TTC2 378 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmem102Q3UPR7 509 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tas2r106Q7M724 308 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 LppQ8BFW7 613 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Uts2rQ8VIH9 385 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dnajb8Q9QYI7 227 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 9930021J03RikH3BKP8 2027 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 4930402K13RikB1AW18 415 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 OtcP11725 354 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Sept4P28661 478 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prr27Q3SYJ2 352 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 1700057G04RikQ3V0U0 232 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 SnupnQ80W37 358 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cdk3Q80YP0 303 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rhox11Q810N8 206 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cdkl3Q8BLF2 595 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cndp1Q8BUG2 492 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmem185bQ8R3R5 350 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Med28Q920D3 178 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 BniplQ99JU7 328 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Elp5Q99L85 300 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmem53Q9D0Z3 276 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Izumo4D3Z690 227 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Arl9F7BE40 171 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Psmb10O35955 273 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dhrs7bQ99J47 323 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 ChrdQ9Z0E2 948 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cyp2b13A6H6J2 491 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mknk1O08605 427 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Socs5O54928 536 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dnajc15Q78YY6 149 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dcun1d3Q8K0V2 304 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 TmieQ8K467 153 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 EedQ921E6 441 aaKnown RBP16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Srp54bE9PXC0 504 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fpr-rs6Q3SXG2 339 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc45a3Q8K0H7 553 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Vmn1r74Q8R290 304 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Dapl1Q9D757 107 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rps3P62908 243 aaKnown RBP16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prdx5P99029 210 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Arl5cQ6P068 179 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ttyh3Q6P5F7 524 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 NarsQ8BP47 559 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Wdr37Q8CBE3 496 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 March7Q9WV66 693 aa16.05■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Col1a1P11087 1453 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nup98Q6PFD9 1816 aaKnown RBP16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Atp1b2P14231 290 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Defa11P50709 85 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 C8gQ8VCG4 202 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prl2b1Q9DAZ2 228 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Scn7aB1AYL1 1681 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm14496K7N5U4 849 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 AcadvlP50544 656 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 OclnQ61146 521 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tlx2Q61663 284 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Kyat1Q8BTY1 424 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr847Q8VFF4 312 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Herpud2Q9JJC9 404 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gpr155A2AWR3 868 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Scg5P12961 212 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rhox10Q4TU83 196 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tead4Q62296 427 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nipal2Q91WC7 383 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Scgb3a1Q920D7 104 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Arl16B1ATY8 173 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Vmn2r111K7N674 857 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Eml1Q05BC3 814 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Trim24Q64127 1051 aaKnown RBP16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Elp6Q8BK75 266 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Adgrf4Q9D2L6 698 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Q9D454 513 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mecp2Q9Z2D6 484 aaKnown RBP16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Klhl15A2AAX3 604 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Plpp4Q0VBU9 271 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr814Q7TRH4 310 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Map4k5Q8BPM2 847 aaKnown RBP16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Psapl1Q8C1C1 522 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prps1l1Q8C5R8 318 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 NaxeQ8K4Z3 282 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 A0A286YD17 136 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zar1lC3VD30 291 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Prph2P15499 346 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Actr1aP61164 376 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Adra1bP97717 514 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 NaprtQ8CC86 538 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 FtmtQ9D5H4 237 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms