RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ift27Q9D0P8 186 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fam122aQ9DB52 284 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rhox2dW4VSN9 191 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm14781A2A9Q9 366 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr1123A2AT85 323 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Btbd35f28A2CFD5 498 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Btbd35f30J3QML3 498 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Vmn2r111K7N674 857 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 ItgamP05555 1153 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Abcb1aP21447 1276 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Wnt6P22727 364 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 StsP50427 624 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Stard6P59096 233 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Mageb5Q14AN0 366 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Pyroxd2Q3U4I7 581 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Pon2Q62086 354 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Atl1Q8BH66 558 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Efemp1Q8BPB5 493 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 UstQ8BUB6 407 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Dpep2Q8C255 478 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 SynpoQ8CC35 929 aaKnown RBP17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Agpat4Q8K4X7 378 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gbgt1Q8VI38 347 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Acsl6Q91WC3 697 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Q99LU8 229 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tnfrsf12aQ9CR75 129 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 2310003L06RikQ9CV82 495 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Aar2Q9D2V5 384 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Atp5dQ9D3D9 168 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 TsaccQ9DA44 124 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 PalmdQ9JHU2 551 aa17.97■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ncam1P13595 1115 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Pabpc1P29341 636 aaKnown RBP17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Armc5Q5EBP3 926 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Zscan26Q5RJ54 466 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ppp2r1bQ7TNP2 601 aaKnown RBP17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Znf451Q8C0P7 1056 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Abhd18Q8C1A9 464 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 IrgcQ8C262 412 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 D2hgdhQ8CIM3 535 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cpne5Q8JZW4 593 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Elf5Q8VDK3 253 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr1033Q8VFK5 310 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 HnrnpllQ921F4 591 aaKnown RBP17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr706Q9EPF8 316 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Krt81Q9ERE2 481 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr49Q9Z1V0 313 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tyw5A2RSX7 315 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Vmn2r56E9Q4U5 779 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 GfapP03995 430 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ceacam1P31809 521 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 PdxpP60487 292 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ulk3Q3U3Q1 472 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Dtx3lQ3UIR3 748 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Rbbp4Q60972 425 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Cyp1b1Q64429 543 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr765Q7TRI6 309 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Slc7a6Q8BGK6 515 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Fndc5Q8K4Z2 209 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr767Q8VG33 309 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr807Q8VGI9 311 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Olfr541Q8VGM0 312 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 EdaraddQ8VHX2 208 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Ceacam2Q925P2 520 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Itgb3bpQ9CQ82 176 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Gm26657Q9CVR1 127 aa17.96■□□□□ 0.47
Shkbp1-201ENSMUST00000003857 Tnfrsf25B1AWN9 411 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cldn2O88552 230 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Gja1P23242 382 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Hsf2P38533 535 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Pebp1P70296 187 aaKnown RBP17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cxcr4P70658 359 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cds1P98191 461 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Tgm3Q08189 693 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 CamkmtQ3U2J5 323 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Q3UST5 385 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Cr1lQ64735 483 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Casd1Q7TN73 797 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 PdhxQ8BKZ9 501 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 AntxrlQ8BVM2 641 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Ddx52Q8K301 598 aaKnown RBP17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Camk1gQ91VB2 477 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Pcdhga11Q91XY8 933 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Atg13Q91YI1 516 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Spg21Q9CQC8 308 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Hspa12bQ9CZJ2 685 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Agpat5Q9D1E8 365 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Mrps33Q9D2R8 106 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Scamp4Q9JKV5 230 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 DstnQ9R0P5 165 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 TspearJ3S6Y1 670 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Fabp3P11404 133 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 EnpepP16406 945 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Serpine1P22777 402 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Rpl6P47911 296 aaKnown RBP17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 BckdhaP50136 442 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Tbpl1P62340 186 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Aup1P70295 410 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 Zfp935Q14DI0 353 aa17.95■□□□□ 0.46
Shkbp1-201ENSMUST00000003857 H2-M3Q31093 336 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms