RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ING3Q9NXR8 418 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TMCC3Q9ULS5 477 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 SLC22A14Q9Y267 594 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 SNX11Q9Y5W9 270 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 MN1Q10571 1320 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-227ENST00000640957 C2orf92A0A1B0GVN3 265 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 AKAP8O43823 692 aaKnown RBP13.19□□□□□ -0.3
SCARB2-227ENST00000640957 B4GALT3O60512 393 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 MTX2O75431 263 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 PRLP01236 227 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
SCARB2-227ENST00000640957 DUSP4Q13115 394 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 SERINC3Q13530 473 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 UMODL1-AS1Q8N2C9 162 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 EID2BQ96D98 161 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 C1QTNF7Q9BXJ2 289 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TBC1D17Q9HA65 648 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ASAH2Q9NR71 780 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 C5orf42Q9H799 3197 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 KLK8O60259 260 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ALDH1A1P00352 501 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ITGA1P56199 1179 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF33AQ06730 810 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 GAB1Q13480 694 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 GPR68Q15743 365 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ATAT1Q5SQI0 421 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 CNIH2Q6PI25 160 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 CCDC149Q6ZUS6 474 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 CBLL1Q75N03 491 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 ANGPTL6Q8NI99 470 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TMEM161AQ9NX61 479 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 TVP23BQ9NYZ1 205 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 RIMKLBQ9ULI2 386 aa13.19□□□□□ -0.3
SCARB2-227ENST00000640957 SCN4AP35499 1836 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF33A0A0G2JMD5 474 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 PRAMEF10O60809 474 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CD79BP40259 229 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CRYBB2P43320 205 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CLDN8P56748 225 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 GRM7Q14831 915 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ATP13A5Q4VNC0 1218 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 SPOUT1Q5T280 376 aaKnown RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 IDO2Q6ZQW0 420 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF467Q7Z7K2 595 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 SERPINA9Q86WD7 417 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 NFKBIDQ8NI38 313 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ZNF431Q8TF32 576 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 AKAP1Q92667 903 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 DCLRE1CQ96SD1 692 aaKnown RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 PITX2Q99697 317 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CD244Q9BZW8 370 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ASB8Q9H765 288 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 NUDT4Q9NZJ9 180 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 SSR3Q9UNL2 185 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 A0A0G2JMZ2 1700 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 LRRC37A2A6NM11 1700 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 SLC28A1O00337 649 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 STK16O75716 305 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 IGLV3-25P01717 112 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ARSBP15848 533 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 RHOQP17081 205 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 CHMP24386 653 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 TARDBPQ13148 414 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 COMMD7Q86VX2 200 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 OR11H4Q8NGC9 324 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 UPF1Q92900 1129 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 OTULINQ96BN8 352 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 OTUB1Q96FW1 271 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ERVW-1Q9UQF0 538 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 GPR52Q9Y2T5 361 aa13.18□□□□□ -0.3
SCARB2-227ENST00000640957 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 NNMTP40261 264 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 SRP9P49458 86 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TTPAP49638 278 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CDC42P60953 191 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 RPS25P62851 125 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 OLR1P78380 273 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ABATP80404 500 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MGAT3Q09327 533 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 ZXDCQ2QGD7 858 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 LCN1P1Q5VSP4 162 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 AFMIDQ63HM1 303 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 BMPERQ8N8U9 685 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TMED9Q9BVK6 235 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CLN6Q9NWW5 311 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 NKIRAS2Q9NYR9 191 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 KLK4Q9Y5K2 254 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 KIAA0100Q14667 2235 aaKnown RBP13.17□□□□□ -0.3
SCARB2-227ENST00000640957 TSC2P49815 1807 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 PIKFYVEQ9Y2I7 2098 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 CASKO14936 926 aa13.17□□□□□ -0.3
SCARB2-227ENST00000640957 MYL12BO14950 172 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms