RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 VPS11Q9H270 941 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 COPS7BQ9H9Q2 264 aaPredicted RBP16.62■□□□□ 0.25
PTPN11-207ENST00000639857 KCNK13Q9HB14 408 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 ABI3Q9P2A4 366 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 ANGPTL3Q9Y5C1 460 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 HIVEP3Q5T1R4 2406 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 LRRK2Q5S007 2527 aa16.62■□□□□ 0.25
PTPN11-207ENST00000639857 BLACEA4D250 179 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 SAGE2PA6NJ88 616 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 SCELO95171 688 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 PIK3CBP42338 1070 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 PLA2G16P53816 162 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 ZNF33BQ06732 778 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 MEP1AQ16819 746 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 PFKFB4Q16877 469 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 FHL5Q5TD97 284 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 LGSNQ5TDP6 509 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 CHSY3Q70JA7 882 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 ZNF595Q8IYB9 648 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 EIF1ADQ8N9N8 165 aaKnown RBP16.61■□□□□ 0.25
PTPN11-207ENST00000639857 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 OR7G3Q8NG95 312 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 DCAKDQ8WVC6 231 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 REPS1Q96D71 796 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 CMTM7Q96FZ5 175 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 TBCDQ9BTW9 1192 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 LYRM4Q9HD34 91 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 STMN3Q9NZ72 180 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 NFU1Q9UMS0 254 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 DAPP1Q9UN19 280 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 PCDHGB6Q9Y5F9 930 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 PCDHGA11Q9Y5H2 935 aa16.61■□□□□ 0.25
PTPN11-207ENST00000639857 EXOC1LA0A1B0GW35 172 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 STX16-NPEPL1H3BU86 382 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 STX16O14662 325 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 CBX6O95503 412 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 WDPCPO95876 746 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 BTG2P78543 158 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 PHEXP78562 749 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 SRSF1Q07955 248 aaKnown RBP eCLIP16.6■□□□□ 0.25
PTPN11-207ENST00000639857 RUNX2Q13950 521 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 ACER2Q5QJU3 275 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 ADNP2Q6IQ32 1131 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 FAM180AQ6UWF9 173 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 LCA5Q86VQ0 697 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 TEX9Q8N6V9 391 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 ST6GALNAC3Q8NDV1 305 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 CATSPER1Q8NEC5 780 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 SUN3Q8TAQ9 357 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 ELP5Q8TE02 316 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 MTBPQ96DY7 904 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 PRDM7Q9NQW5 492 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 FETUBQ9UGM5 382 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 NTNG1Q9Y2I2 539 aa16.6■□□□□ 0.25
PTPN11-207ENST00000639857 POC1B-GALNT4F8VUJ3 575 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 H0YIV9 168 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 E2F3O00716 465 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 SNRPAP09012 282 aaKnown RBP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 EDN3P14138 238 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 MAOAP21397 527 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 CERS1P27544 350 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 LIM2P55344 173 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 GTF2H2Q13888 395 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 NR6A1Q15406 480 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 C10orf62Q5T681 223 aaPredicted RBP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 GTF2H2CQ6P1K8 395 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 PLD6Q8N2A8 252 aaKnown RBP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 ARMC10Q8N2F6 343 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 BCORP1Q8N888 145 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 GRHL3Q8TE85 626 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 FAR1Q8WVX9 515 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 F2RL3Q96RI0 385 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 ACTR8Q9H981 624 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 NECTIN3Q9NQS3 549 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 PRTFDC1Q9NRG1 225 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 PLA2G3Q9NZ20 509 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 CPSF2Q9P2I0 782 aaKnown RBP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 PPIEQ9UNP9 301 aaKnown RBP16.59■□□□□ 0.25
PTPN11-207ENST00000639857 SPACA6W5XKT8 324 aa16.59■□□□□ 0.25
PTPN11-207ENST00000639857 ZGRF1Q86YA3 2104 aa16.58■□□□□ 0.25
PTPN11-207ENST00000639857 POLEQ07864 2286 aa16.58■□□□□ 0.25
PTPN11-207ENST00000639857 USP9XQ93008 2570 aaPredicted RBP16.58■□□□□ 0.25
PTPN11-207ENST00000639857 A0A0G2JN53 185 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 ANKUB1A6NFN9 424 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 A8MUI8 341 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 TRIM49D1C9J1S8 452 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 FAM227AF5H4B4 570 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 CYR61O00622 381 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 RIPK2O43353 540 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 PRAMEF2O60811 474 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 PCNAP12004 261 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 ELOAQ14241 798 aaKnown RBP16.58■□□□□ 0.24
PTPN11-207ENST00000639857 KHDRBS2Q5VWX1 349 aaKnown RBP16.58■□□□□ 0.24
PTPN11-207ENST00000639857 ADGRD1Q6QNK2 874 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 TIFABQ6ZNK6 161 aa16.58■□□□□ 0.24
PTPN11-207ENST00000639857 GOLGA7Q7Z5G4 137 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms