RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 FAM47BQ8NA70 645 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 KIF18AQ8NI77 898 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 UBE2E3Q969T4 207 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 PSMG3-AS1Q96PY0 264 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 F2RL3Q96RI0 385 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 SERINC2Q96SA4 455 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 OLAHQ9NV23 265 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 MMACHCQ9Y4U1 282 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 ANGPTL3Q9Y5C1 460 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 IKBKGQ9Y6K9 419 aa15.71■□□□□ 0.11
CACNA1A-259ENST00000638114 UTP20O75691 2785 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 CCDC189A1A4V9 331 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 SAGE2PA6NJ88 616 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 EDN3P14138 238 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 EPB42P16452 691 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ECHS1P30084 290 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 CASP2P42575 452 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ST13P50502 369 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 SETDB1Q15047 1291 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ACAP2Q15057 778 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 PFKFB4Q16877 469 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 MED27Q6P2C8 311 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 TAOK1Q7L7X3 1001 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 MYLK4Q86YV6 388 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 KIF2BQ8N4N8 673 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 UHMK1Q8TAS1 419 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ELP5Q8TE02 316 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ADAMTS18Q8TE60 1221 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 SLC44A1Q8WWI5 657 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 TAAR6Q96RI8 345 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 PAFAH2Q99487 392 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 NPAS2Q99743 824 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 UTP23Q9BRU9 249 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 FUT8Q9BYC5 575 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 PRTFDC1Q9NRG1 225 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 ANKRD10Q9NXR5 420 aa15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 CPSF2Q9P2I0 782 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-259ENST00000638114 GABRR3A8MPY1 467 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 POC1B-GALNT4F8VUJ3 575 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 CLDN4O14493 209 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 MAN1A2O60476 641 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 SH3BGRLO75368 114 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 RASAL1O95294 804 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 RNF224P0DH78 156 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 GP1BBP13224 206 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 HNRNPFP52597 415 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 SLC13A2Q13183 592 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 TUBA3CQ13748 450 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 E2F2Q14209 437 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 NAA30Q147X3 362 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF766Q5HY98 468 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 TUBA3EQ6PEY2 450 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 SCUBE1Q8IWY4 988 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF473Q8WTR7 871 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 KCNC2Q96PR1 638 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 SLX1AQ9BQ83 275 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 MS4A8Q9BY19 250 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 CDCP1Q9H5V8 836 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 PNO1Q9NRX1 252 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 ERRFI1Q9UJM3 462 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 POLEQ07864 2286 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 ICE1Q9Y2F5 2266 aa15.69■□□□□ 0.1
CACNA1A-259ENST00000638114 LRRC14BA6NHZ5 514 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 CYSRT1A8MQ03 144 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 MYO1DO94832 1006 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 TGFB1P01137 390 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 SERPINB1P30740 379 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 SERPINB9P50453 376 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 ALDH18A1P54886 795 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 LIM2P55344 173 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 HSD17B7P56937 341 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 OC90Q02509 493 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 PCDH1Q08174 1060 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 DDX39BQ13838 428 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 RCN2Q14257 317 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 OR1C1Q15619 314 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 TECRLQ5HYJ1 363 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 GRHL2Q6ISB3 625 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 CLNKQ7Z7G1 428 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 RPS19BP1Q86WX3 136 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 ZNF595Q8IYB9 648 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 LAS2Q8IYD9 372 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 LGI4Q8N135 537 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 CEP112Q8N8E3 955 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 TMEM52Q8NDY8 209 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 SRFBP1Q8NEF9 429 aaKnown RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 NFAM1Q8NET5 270 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 OR7G3Q8NG95 312 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 NR4A3Q92570 626 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 TRIM44Q96DX7 344 aaPredicted RBP15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 C5orf34Q96MH7 638 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 GPR78Q96P69 363 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 CSF3RQ99062 836 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 ROGDIQ9GZN7 287 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 ACTR8Q9H981 624 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 PRDM7Q9NQW5 492 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 KLHL1Q9NR64 748 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 DAPP1Q9UN19 280 aa15.68■□□□□ 0.1
CACNA1A-259ENST00000638114 OSGIN2Q9Y236 505 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms