RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CYP4B1	P13584	511 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LHCGR	P22888	699 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	HOXA9	P31269	272 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CASP2	P42575	452 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SLC1A2	P43004	574 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GATM	P50440	423 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RAB13	P51153	203 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	HK3	P52790	923 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ERVFC1	P60507	584 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ERVK-8	P63133	956 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RPP38	P78345	283 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ABAT	P80404	500 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PLD1	Q13393	1074 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TUSC1	Q2TAM9	212 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	FLYWCH1	Q4VC44	716 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PYDC2	Q56P42	97 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ARTN	Q5T4W7	220 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TRIQK	Q629K1	86 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ALG1L	Q6GMV1	187 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	OR4F3	Q6IEY1	312 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TMEM107	Q6UX40	140 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF783	Q6ZMS7	281 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LAX1	Q8IWV1	398 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CRIPAK	Q8N1N5	446 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	IGSF8	Q969P0	613 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PSMG2	Q969U7	264 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TADA1	Q96BN2	335 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PHF21B	Q96EK2	531 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SIPA1	Q96FS4	1042 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TRMT2B	Q96GJ1	504 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ITCH	Q96J02	903 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ARL5B	Q96KC2	179 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF558	Q96NG5	402 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RBP7	Q96R05	134 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CDCA4	Q9BXL8	241 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GABARAPL3	Q9BY60	117 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	MFSD1	Q9H3U5	465 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TUBB1	Q9H4B7	451 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ZFP64	Q9NPA5	681 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SLAMF8	Q9P0V8	285 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SEC14L4	Q9UDX3	406 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	NDRG3	Q9UGV2	375 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	DTX4	Q9Y2E6	619 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SCN5A	Q14524	2016 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LTBP2	Q14767	1821 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306		A0A096LPI6	279 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306		A0A1B0GVI7	797 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SLC22A23	A1A5C7	686 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SIGLEC6	O43699	453 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	DPM1	O60762	260 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GPX5	O75715	221 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LALBA	P00709	142 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SOD2	P04179	222 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	IFNA4	P05014	189 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TSPAN19	P0C672	248 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF37A	P17032	561 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	LAG3	P18627	525 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ITGB7	P26010	798 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	C21orf33	P30042	268 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RPS19	P39019	145 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	DIO3	P55073	304 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SLC10A7	Q0GE19	358 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ABR	Q12979	859 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	NPRL3	Q12980	569 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RPA4	Q13156	261 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SP140	Q13342	867 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ADAM15	Q13444	863 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TP53BP2	Q13625	1128 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GPNMB	Q14956	572 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GTDC1	Q4AE62	458 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ATP6AP1L	Q52LC2	224 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PABPC1L2A	Q5JQF8	200 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	SPOUT1	Q5T280	376 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	METTL11B	Q5VVY1	283 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	OR2T5	Q6IEZ7	315 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ESRP1	Q6NXG1	681 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	FAHD1	Q6P587	224 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	RPS27L	Q71UM5	84 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	EIF4E3	Q8N5X7	224 aa	Known RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CLDN22	Q8N7P3	220 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	OR2T29	Q8NH02	315 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CLHC1	Q8NHS4	586 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TMEM169	Q96HH4	297 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	IGSF21	Q96ID5	467 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	DEFB118	Q96PH6	123 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CINP	Q9BW66	212 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TAPBPL	Q9BX59	468 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	BARHL1	Q9BZE3	327 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CD244	Q9BZW8	370 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	ZNF436	Q9C0F3	470 aa	Predicted RBP	10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	MED28	Q9H204	178 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GALNT9	Q9HCQ5	603 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	KRT84	Q9NSB2	600 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	GIMAP2	Q9UG22	337 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	TINAG	Q9UJW2	476 aa		10.34	□□□□□ -0.75
CHD2-223	ENST00000636306	CHD5	Q8TDI0	1954 aa		10.33	□□□□□ -0.76
CHD2-223	ENST00000636306	LOC285095	A0A1B0GVY8	99 aa		10.33	□□□□□ -0.76
CHD2-223	ENST00000636306	UBA6	A0AVT1	1052 aa	Predicted RBP	10.33	□□□□□ -0.76
CHD2-223	ENST00000636306	C2orf81	A6NN90	581 aa		10.33	□□□□□ -0.76

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