RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 RNF11Q9Y3C5 154 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 SIT1Q9Y3P8 196 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 SNAI1O95863 264 aaPredicted RBP15.52■□□□□ 0.07
CLN5-208ENST00000636183 CCL11P51671 97 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 HERVK_113P63132 956 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 FANK1Q8TC84 345 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 ERVK-6Q9BXR3 956 aa15.52■□□□□ 0.07
CLN5-208ENST00000636183 ANKRD28O15084 1053 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 GGT5P36269 586 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 NR1H2P55055 460 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 DSC3Q14574 896 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TMEM44Q2T9K0 475 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 ROBO3Q96MS0 1386 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 VSTM2BA6NLU5 285 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 LHCGRP22888 699 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 DPY19L1Q2PZI1 675 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 ASB18Q6ZVZ8 466 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 ARL14Q8N4G2 192 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 INO80EQ8NBZ0 244 aaPredicted RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 RAB8BQ92930 207 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 PITX2Q99697 317 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 SP140LQ9H930 580 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 EDARQ9UNE0 448 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 EPCAMP16422 314 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 GDF10P55107 478 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TPRG1LQ5T0D9 272 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 PTCRAQ6ISU1 281 aaPredicted RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 MUC13Q9H3R2 512 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 IGSF9Q9P2J2 1179 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 RPL36Q9Y3U8 105 aaKnown RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 SOX14O95416 240 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TMEM11P17152 192 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 SLC6A6P31641 620 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 CRISP1P54107 249 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TNFAIP8L3Q5GJ75 292 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 ERI1Q8IV48 349 aaKnown RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 CROCCP3Q8IVE0 287 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TMEFF1Q8IYR6 380 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 LGI4Q8N135 537 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 NATD1Q8N6N6 113 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 GEMIN6Q8WXD5 167 aaKnown RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 SFXN2Q96NB2 322 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 AMBNQ9NP70 447 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 XPNPEP1Q9NQW7 623 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 C14orf105Q9NVL8 296 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 CDH22Q9UJ99 828 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 DNAJA2O60884 412 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 IFNGR1P15260 489 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 CD40LGP29965 261 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 TRIM43Q96BQ3 446 aaPredicted RBP15.51■□□□□ 0.07
CLN5-208ENST00000636183 ARL5BQ96KC2 179 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 FBRSQ9HAH7 460 aa15.51■□□□□ 0.07
CLN5-208ENST00000636183 FABP12A6NFH5 140 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 EEF1E1-BLOC1S5C9J1V9 151 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 EEF1E1O43324 174 aaKnown RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 EDNRBP24530 442 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 GDF1P27539 372 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 MAZP56270 477 aaKnown RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 GSTM4Q03013 218 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 PAQR7Q86WK9 346 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 RNF130Q86XS8 419 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SLC44A3Q8N4M1 653 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 HERC2P3Q9BVR0 1158 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 TULP2O00295 520 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 MAGEA2P43356 314 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SLC18A2Q05940 514 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 DUOXA1Q1HG43 343 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 OR4N5Q8IXE1 308 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SVOPLQ8N434 492 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 OR10T2Q8NGX3 314 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 RNPEPL1Q9HAU8 725 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 DLGAP4Q9Y2H0 992 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 IGLV3-22A0A075B6J6 115 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SHOXO15266 292 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 IL32P24001 234 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SMSP52788 366 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 LRIT3Q3SXY7 679 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 ZNF550Q7Z398 422 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 MARCH9Q86YJ5 346 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 PQLC1Q8N2U9 271 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 OR4F6Q8NGB9 312 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 ZC3HAV1LQ96H79 300 aaKnown RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 NECAB3Q96P71 396 aaPredicted RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 IL17FQ96PD4 163 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 HIF1ANQ9NWT6 349 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SMPD3Q9NY59 655 aaPredicted RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 NPHS1O60500 1241 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 C5AR1P21730 350 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 APLNRP35414 380 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SLC9A3P48764 834 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 CDK6Q00534 326 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 MPP2Q14168 576 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 SNX29P2Q8IUI4 249 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 HSPA12BQ96MM6 686 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 PLSCR5A0PG75 271 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 TTLL8A6PVC2 850 aa15.5■□□□□ 0.07
CLN5-208ENST00000636183 CAPN5O15484 640 aaPredicted RBP15.5■□□□□ 0.07
CLN5-208ENST00000636183 RAB36O95755 333 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms