RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IFT52Q9Y366 437 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 SAMHD1Q9Y3Z3 626 aaKnown RBP2.8□□□□□ -1.96
PSPC1-208ENST00000635562 STON1Q9Y6Q2 735 aa2.8□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF541Q9H0D2 1346 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KIR2DS5A0A0G2JLQ3 304 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SMIM35A0A1B0GVV1 85 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1W2PPM1 405 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FAM149AA5PLN7 773 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ARHGEF35A5YM69 484 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA6L10A6NI86 522 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CBY3A6NI87 242 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 OR6C70A6NIJ9 312 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CD8B2A6NJW9 211 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ASB14A6NK59 587 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MAGEB17A8MXT2 336 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CENPBD1B2RD01 187 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA8KD6RF30 607 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 E5RJQ4 531 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 H3BQ06 376 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KIR2DS3K7RE56 304 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ITGB1BP1O14713 200 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MAGEB2O15479 319 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF208O43345 1280 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MSI1O43347 362 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TLX3O43711 291 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GATCO43716 136 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FCMRO60667 390 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 JAK2O60674 1132 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HCN1O60741 890 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NDUFS3O75489 264 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NEBLO76041 1014 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GLCEO94923 617 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 STBD1O95210 358 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PIGNO95427 931 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GAS8O95995 478 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 IFNA14P01570 189 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HMGN1P05114 100 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 UGT2B4P06133 528 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HMBSP08397 361 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PLEKP08567 350 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SBK2P0C263 348 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LINGO3P0C6S8 592 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PLA2G4BP0C869 781 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CALM1P0DP23 149 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CALM2P0DP24 149 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CALM3P0DP25 149 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CD72P21854 359 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CCNOP22674 350 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PSMB6P28072 239 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HTR2AP28223 471 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PDHA2P29803 388 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CHRNA5P30532 468 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HMGCLP35914 325 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NAA10P41227 235 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GRIA1P42261 906 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NAMPTP43490 491 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KCNJ3P48549 501 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SLC9A3P48764 834 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CASP4P49662 377 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CSNK1EP49674 416 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GMPSP49915 693 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RAB9AP51151 201 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ARSFP54793 590 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FOXG1P55316 489 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RPS13P62277 151 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RPS15P62841 145 aaKnown RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 GALK2Q01415 458 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 HSF2Q03933 536 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SRSF1Q07955 248 aaKnown RBP eCLIP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KLF9Q13886 244 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RUNX2Q13950 521 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RCAN2Q14206 197 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF268Q14587 947 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PTPRCAPQ14761 206 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SHBQ15464 509 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 UGCGQ16739 394 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SGSM1Q2NKQ1 1148 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 VWC2Q2TAL6 325 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 MIDNQ504T8 468 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KLHL22Q53GT1 634 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CDKL4Q5MAI5 379 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 LDLRAP1Q5SW96 308 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PRAMEF5Q5TYX0 476 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 ATF7IP2Q5U623 682 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PRAMEF6Q5VXH4 476 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PLCXD3Q63HM9 321 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 SEL1L3Q68CR1 1132 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KRT39Q6A163 491 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 NEPROQ6NW34 567 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM71Q6P5X7 295 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 RFWD3Q6PCD5 774 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 PODNL1Q6PEZ8 512 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TTC33Q6PID6 262 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FBXO46Q6PJ61 603 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 IL20RBQ6UXL0 311 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 TMIGD1Q6UXZ0 262 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 KCTD8Q6ZWB6 473 aa2.79□□□□□ -1.96
PSPC1-208ENST00000635562 CYP4V2Q6ZWL3 525 aaPredicted RBP2.79□□□□□ -1.96
PSPC1-208ENST00000635562 FAM122BQ7Z309 247 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms