RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 WDR55Q9H6Y2 383 aaPredicted RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MEAF6Q9HAF1 191 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 GIMAP2Q9UG22 337 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 BCAP29Q9UHQ4 241 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 PPT2Q9UMR5 302 aa13.73□□□□□ -0.21
LINC00339-208ENST00000634934 MDC1Q14676 2089 aaKnown RBP13.73□□□□□ -0.21
LINC00339-208ENST00000634934 A0A0G2JN53 185 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 FITM1A5D6W6 292 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
LINC00339-208ENST00000634934 EPHA3P29320 983 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 ETV5P41161 510 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 MTTPP55157 894 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 TGM3Q08188 693 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 CUL3Q13618 768 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 NDUFA9Q16795 377 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 SLC9B1Q4ZJI4 515 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 XKR7Q5GH72 579 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 NXNQ6DKJ4 435 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 TMEM214Q6NUQ4 689 aaKnown RBP13.72□□□□□ -0.21
LINC00339-208ENST00000634934 TRIM40Q6P9F5 258 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 ACAD11Q709F0 780 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 ABHD13Q7L211 337 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 TMPRSS7Q7RTY8 843 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 CACTIN-AS1Q8N1I8 211 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 GAL3ST3Q96A11 431 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 RGMAQ96B86 450 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 ECSITQ9BQ95 431 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 C17orf62Q9BQA9 187 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 NDC1Q9BTX1 674 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 FBXO8Q9NRD0 319 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 MRPS2Q9Y399 296 aaKnown RBP13.72□□□□□ -0.21
LINC00339-208ENST00000634934 CCL27Q9Y4X3 112 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 FREM2Q5SZK8 3169 aa13.72□□□□□ -0.21
LINC00339-208ENST00000634934 KNTC1P50748 2209 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 H3BMH7 237 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 RTCAO00442 366 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SDHDO14521 159 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ZNF749O43361 778 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SEC22BO75396 215 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SCRG1O75711 98 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 RSL1D1O76021 490 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 B3GALT4O96024 378 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 FGF5P12034 268 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ALAS2P22557 587 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SNRPNP63162 240 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ACSM2AQ08AH3 577 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 AP5B1Q2VPB7 878 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 FAM214AQ32MH5 1076 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ATP6AP1LQ52LC2 224 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ACSM2BQ68CK6 577 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 PWWP2BQ6NUJ5 590 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 TMEM154Q6P9G4 183 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SRFBP1Q8NEF9 429 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 OR2L5Q8NG80 312 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 FBXO27Q8NI29 283 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 UTP15Q8TED0 518 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 PMEPA1Q969W9 287 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 APIPQ96GX9 242 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 C10orf90Q96M02 699 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 SORBS1Q9BX66 1292 aaKnown RBP13.71□□□□□ -0.21
LINC00339-208ENST00000634934 ZNF385DQ9H6B1 395 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 LRTM1Q9HBL6 345 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 CUTCQ9NTM9 273 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 AHSPQ9NZD4 102 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.21
LINC00339-208ENST00000634934 CHD8Q9HCK8 2581 aa13.71□□□□□ -0.22
LINC00339-208ENST00000634934 CELSR3Q9NYQ7 3312 aa13.71□□□□□ -0.22
LINC00339-208ENST00000634934 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 C4orf51C9J302 202 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 PLPP1O14494 284 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 LSM1O15116 133 aaKnown RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 VPS4BO75351 444 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 SEMA3DO95025 777 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 TIAF1O95411 115 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 CAPNS1P04632 268 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 ALOX12P18054 663 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 IL1RNP18510 177 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 SSR2P43308 183 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 ARSFP54793 590 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 RAB15P59190 212 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 BTN3A2P78410 334 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 TBL3Q12788 808 aaKnown RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
LINC00339-208ENST00000634934 DEFB134Q4QY38 66 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 GARNL3Q5VVW2 1013 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 ABHD17CQ6PCB6 329 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 TTLL10Q6ZVT0 673 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 UBE3DQ7Z6J8 389 aa13.7□□□□□ -0.22
LINC00339-208ENST00000634934 FBXW8Q8N3Y1 598 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms