RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 SLC22A9Q8IVM8 553 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 CYP4X1Q8N118 509 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ADAMTS18Q8TE60 1221 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 PPP4R1Q8TF05 950 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 AENQ8WTP8 325 aaKnown RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 MTERF1Q99551 399 aaKnown RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 PARD6BQ9BYG5 372 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 RBCK1Q9BYM8 510 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 ZBTB26Q9HCK0 441 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 PRDM9Q9NQV7 894 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 GRID1Q9ULK0 1009 aa15.75■□□□□ 0.11
UBE3D-208ENST00000626828 MRPS33Q9Y291 106 aaKnown RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 V9GYY5 206 aaPredicted RBP15.75■□□□□ 0.11
UBE3D-208ENST00000626828 IGHV3-20A0A0C4DH32 117 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 SMIM23A6NLE4 172 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 J3QKU1 62 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 FOXE1O00358 373 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 DLX3O60479 287 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 RPS17P08708 135 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 NUDT17P0C025 328 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 IMPDH1P20839 514 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ATP5A1P25705 553 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 TSFMP43897 325 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 HERVK_113P63132 956 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 BTG2P78543 158 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ZRSR2Q15696 482 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 SFT2D3Q587I9 215 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 CRB2Q5IJ48 1285 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 C10orf62Q5T681 223 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 OR4C11Q6IEV9 310 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 IGFL2Q6UWQ7 119 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 RBMXL3Q8N7X1 1067 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ACOT4Q8N9L9 421 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 EPS8L3Q8TE67 593 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ZNF483Q8TF39 744 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 PSMF1Q92530 271 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 CAVIN3Q969G5 261 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 NSUN5Q96P11 429 aaKnown RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 LPAR4Q99677 370 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ERVK-6Q9BXR3 956 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 OR51B5Q9H339 312 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 ROPN1Q9HAT0 212 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 LYRM4Q9HD34 91 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 SEMA4BQ9NPR2 832 aaPredicted RBP15.74■□□□□ 0.11
UBE3D-208ENST00000626828 DAPP1Q9UN19 280 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 MMACHCQ9Y4U1 282 aa15.74■□□□□ 0.11
UBE3D-208ENST00000626828 GLRA3O75311 464 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SH3BGRLO75368 114 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SEC24DO94855 1032 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SUPT7LO94864 414 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 OTCP00480 354 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 HIST1H1TP22492 207 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CRHR1P34998 444 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 RAP1GDS1P52306 607 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 PRKAA2P54646 552 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CDH13P55290 713 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 LIM2P55344 173 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 HSD17B7P56937 341 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 IFFO1Q0D2I5 559 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CUL3Q13618 768 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 EXT1Q16394 746 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CCDC153Q494R4 210 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 NADK2Q4G0N4 442 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 PLAG1Q6DJT9 500 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 TTC19Q6DKK2 380 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-208ENST00000626828 ZNF595Q8IYB9 648 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 RIBC1Q8N443 379 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-208ENST00000626828 MYRIPQ8NFW9 859 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 OR52B6Q8NGF0 335 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 WDR20Q8TBZ3 569 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 M1APQ8TC57 530 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 TSLPQ969D9 159 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 PNPLA2Q96AD5 504 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CCDC126Q96EE4 140 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 CDK15Q96Q40 435 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 WDR77Q9BQA1 342 aaPredicted RBP15.73■□□□□ 0.11
UBE3D-208ENST00000626828 MFRPQ9BY79 579 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 EPS8L2Q9H6S3 715 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SLAMF7Q9NQ25 335 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 DMRT3Q9NQL9 472 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 PRTFDC1Q9NRG1 225 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 KCMF1Q9P0J7 381 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 PPT2Q9UMR5 302 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SPACA6W5XKT8 324 aa15.73■□□□□ 0.11
UBE3D-208ENST00000626828 SYNDIG1LA6NDD5 238 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 TTLL8A6PVC2 850 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 FOXO6A8MYZ6 492 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 CYR61O00622 381 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 CTNSO60931 367 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 SCELO95171 688 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 CERS1P27544 350 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 SSR2P43308 183 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 NEK2P51955 445 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 RPS13P62277 151 aaKnown RBP15.72■□□□□ 0.11
UBE3D-208ENST00000626828 TLE1Q04724 770 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 CLCQ05315 142 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 TRAF3Q13114 568 aa15.72■□□□□ 0.11
UBE3D-208ENST00000626828 MFAP5Q13361 173 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms