RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CRHR1P34998 444 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 CCL11P51671 97 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 MTTPP55157 894 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 POLE2P56282 527 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 FOXL2P58012 376 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 CLCQ05315 142 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 EEF1A2Q05639 463 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 KLC1Q07866 573 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 ZNF844Q08AG5 666 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 RCN2Q14257 317 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 ZRSR2Q15696 482 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TBR1Q16650 682 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 AP5B1Q2VPB7 878 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TUBB8Q3ZCM7 444 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TMEM35AQ53FP2 167 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 ADNP2Q6IQ32 1131 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 GPRIN3Q6ZVF9 776 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 RPS27LQ71UM5 84 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TRABD2AQ86V40 505 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 AMER3Q8N944 861 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 OR2L5Q8NG80 312 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 OR7G3Q8NG95 312 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 OR4F6Q8NGB9 312 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 OR52B6Q8NGF0 335 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 HUS1BQ8NHY5 278 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 UTP15Q8TED0 518 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 MZB1Q8WU39 189 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 SNRNP27Q8WVK2 155 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 MTFMTQ96DP5 389 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TM4SF19Q96DZ7 209 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 WDR34Q96EX3 536 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 ZIM3Q96PE6 472 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 KCNC2Q96PR1 638 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 TMEM237Q96Q45 408 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 F2RL3Q96RI0 385 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 SARGQ9BW04 601 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 ROGDIQ9GZN7 287 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 SLC26A1Q9H2B4 701 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 KCNK9Q9NPC2 374 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 DMRT3Q9NQL9 472 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 SLC22A11Q9NSA0 550 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 P4HTMQ9NXG6 502 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 C19orf25Q9UFG5 118 aaPredicted RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 FBXL4Q9UKA2 621 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 SNX6Q9UNH7 406 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 MRPS33Q9Y291 106 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 RNF11Q9Y3C5 154 aa6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 URB1O60287 2271 aaKnown RBP6.83□□□□□ -1.32
NPLOC4-221ENST00000625705 NSG1A0A0A6YYJ2 146 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 LRIT2A6NDA9 550 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 A6NL46 340 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 AGPSO00116 658 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CLDN4O14493 209 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 OR7A17O14581 309 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CHST10O43529 356 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PLIN3O60664 434 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PRAMEF4O60810 478 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 B4GALT2O60909 372 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KLF7O75840 302 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 SASH3O75995 380 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 OR4F21O95013 312 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KRT6AP02538 564 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KRT6BP04259 564 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ALPPP05187 535 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 UMODP07911 640 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 C8orf89P0DMQ9 161 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 IMPDH1P20839 514 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 IL10P22301 178 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ITGA3P26006 1051 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CERS1P27544 350 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PIK3CBP42338 1070 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CASP2P42575 452 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KRT6CP48668 564 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PGDP52209 483 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PRKAA2P54646 552 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 NAGLUP54802 743 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 NAA20P61599 178 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 RPS13P62277 151 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ACTN3Q08043 901 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 LCP2Q13094 533 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KCNAB2Q13303 367 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 LY6DQ14210 128 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ABRAXAS2Q15018 415 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 IMPG1Q17R60 797 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ZNF678Q5SXM1 525 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PRAMEF9Q5VWM5 478 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 KHDRBS2Q5VWX1 349 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 FRG2Q64ET8 278 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CPZQ66K79 652 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CYP20A1Q6UW02 462 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 LRIG3Q6UXM1 1119 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 MED25Q71SY5 747 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 PDSS2Q86YH6 399 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 ZC3H7AQ8IWR0 971 aaKnown RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 LAS2Q8IYD9 372 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 CDYL2Q8N8U2 506 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 TMEM102Q8N9M5 508 aaPredicted RBP6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 FAM47BQ8NA70 645 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 OR5T3Q8NGG3 340 aa6.82□□□□□ -1.32
NPLOC4-221ENST00000625705 C9orf43Q8TAL5 461 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms