RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DNAJC5GQ8N7S2 189 aa14.57□□□□□ -0.08
PMS1-221ENST00000624204 TMEM145Q8NBT3 493 aa14.57□□□□□ -0.08
PMS1-221ENST00000624204 TMEM121BQ9BXQ6 578 aaPredicted RBP14.57□□□□□ -0.08
PMS1-221ENST00000624204 HDHD2Q9H0R4 259 aa14.57□□□□□ -0.08
PMS1-221ENST00000624204 MED28Q9H204 178 aa14.57□□□□□ -0.08
PMS1-221ENST00000624204 CNOT2Q9NZN8 540 aaKnown RBP14.57□□□□□ -0.08
PMS1-221ENST00000624204 SPIN1Q9Y657 262 aaPredicted RBP14.57□□□□□ -0.08
PMS1-221ENST00000624204 LINC00862A6NCI5 91 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 EBLN1P0CF75 366 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 RPL6Q02878 288 aaKnown RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 VGLL4Q14135 290 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 FAM151BQ6UXP7 276 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 TSEN54Q7Z6J9 526 aaKnown RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 LRRC17Q8N6Y2 441 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 KLHL6Q8WZ60 621 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 TADA1Q96BN2 335 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 CTPS2Q9NRF8 586 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 SH3BP4Q9P0V3 963 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 HPGDSO60760 199 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 STK16O75716 305 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 ITPKAP23677 461 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 CHMP24386 653 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 GDPGP1Q6ZNW5 385 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 ZBTB44Q8NCP5 570 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 GPR156Q8NFN8 814 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 LHFPL5Q8TAF8 219 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 NELL2Q99435 816 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 CINPQ9BW66 212 aaPredicted RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 PROM1O43490 865 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 MTRF1O75570 445 aaKnown RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 NCR1O76036 304 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 THP07101 528 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 HOXB9P17482 250 aaPredicted RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 TALDO1P37837 337 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 PTGER3P43115 390 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 CRTC2Q53ET0 693 aaPredicted RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 BRAT1Q6PJG6 821 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 CHMP1BQ7LBR1 199 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 SHFQ7M4L6 423 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 TESCQ96BS2 214 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 METTL2AQ96IZ6 378 aaKnown RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 BOCQ9BWV1 1114 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 SLAMF7Q9NQ25 335 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
PMS1-221ENST00000624204 SCML1Q9UN30 329 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 SNX11Q9Y5W9 270 aa14.56□□□□□ -0.08
PMS1-221ENST00000624204 WASH4PA8MWX3 477 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 CBX4O00257 560 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 PCDH7O60245 1069 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 SLC25A14O95258 325 aaPredicted RBP14.55□□□□□ -0.08
PMS1-221ENST00000624204 SLC25A27O95847 323 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 MSL3P1P0C860 447 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 NAT2P11245 290 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 PTNP21246 168 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 ZNF81P51508 661 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 ABATP80404 500 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 RHAGQ02094 409 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 XKR4Q5GH76 650 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 BCL2L15Q5TBC7 163 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 METTL23Q86XA0 190 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 NAGSQ8N159 534 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 CARNMT1Q8N4J0 409 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 OR52P1PQ8NH57 321 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 ST8SIA2Q92186 375 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 RTP3Q9BQQ7 232 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 SPNS1Q9H2V7 528 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 CLEC4MQ9H2X3 399 aaPredicted RBP14.55□□□□□ -0.08
PMS1-221ENST00000624204 ZNF408Q9H9D4 720 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 B3GAT2Q9NPZ5 323 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 TMEM161AQ9NX61 479 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 E9PQ18 207 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 CASKO14936 926 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 CLDN20P56880 219 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 AANATQ16613 207 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 SPATA2LQ8IUW3 424 aaPredicted RBP14.55□□□□□ -0.08
PMS1-221ENST00000624204 LKAAEAR1Q8TD35 194 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 KCTD7Q96MP8 289 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 MTERF1Q99551 399 aaKnown RBP14.55□□□□□ -0.08
PMS1-221ENST00000624204 MND1Q9BWT6 205 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 KCNN2Q9H2S1 579 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 RDH8Q9NYR8 311 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 TRPS1Q9UHF7 1281 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 ELF5Q9UKW6 265 aaPredicted RBP14.55□□□□□ -0.08
PMS1-221ENST00000624204 PADI2Q9Y2J8 665 aa14.55□□□□□ -0.08
PMS1-221ENST00000624204 SH3D21A4FU49 640 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 LAMP1P11279 417 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 AVPR1BP47901 424 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 CPT1AP50416 773 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 RAB14P61106 215 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 IFI44LQ53G44 452 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 NOXRED1Q6NXP6 359 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 SZRD1Q7Z422 152 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 PGBD3Q8N328 593 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 FAM181AQ8N9Y4 354 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 OR5AK3PQ8NH89 298 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 USP7Q93009 1102 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 MARVELD3Q96A59 401 aa14.54□□□□□ -0.08
PMS1-221ENST00000624204 TRAF4Q9BUZ4 470 aaPredicted RBP14.54□□□□□ -0.08
PMS1-221ENST00000624204 ERVMER34-1Q9H9K5 563 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms