RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 MEP1AQ16819 746 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 TRIM71Q2Q1W2 868 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 CTSL3PQ5NE16 218 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 GALNT18Q6P9A2 607 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM92BQ6ZTR7 304 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 AHSA2Q719I0 299 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 THAP5Q7Z6K1 395 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 GOLM1Q8NBJ4 401 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 PLA2G15Q8NCC3 412 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 TSPEARQ8WU66 669 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 BORCS5Q969J3 196 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 MGME1Q9BQP7 344 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 TDRD1Q9BXT4 1180 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 VPS29Q9UBQ0 182 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 APOBEC3BQ9UH17 382 aaKnown RBP7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 PCDHB3Q9Y5E6 796 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 MAU2Q9Y6X3 613 aa7.97□□□□□ -1.13
PTPDC1-204ENST00000620992 MYO16Q9Y6X6 1858 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC35F4A4IF30 521 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TNFRSF11BO00300 401 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TRIM3O75382 744 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FADS2O95864 444 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TMED10P49755 219 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 HLCSP50747 726 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ALDH3A2P51648 485 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 CCR8P51685 355 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM189BP81408 668 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 CD47Q08722 323 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ITGADQ13349 1161 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 DSC3Q14574 896 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TTC23Q5W5X9 447 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FRG2Q64ET8 278 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ANKRD34AQ69YU3 496 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FAM220AQ7Z4H9 259 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 PTRH1Q86Y79 214 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 PEX5LQ8IYB4 626 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 MOSPD2Q8NHP6 518 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 MRPL48Q96GC5 212 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 NSMCE3Q96MG7 304 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 PTCHD1Q96NR3 888 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FRG2BQ96QU4 278 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ZSCAN5AQ9BUG6 496 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 BOCQ9BWV1 1114 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 C8orf4Q9NR00 106 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TVP23BQ9NYZ1 205 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 NUDT4Q9NZJ9 180 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 VAPAQ9P0L0 249 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 C5AR2Q9P296 337 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 DLGAP4Q9Y2H0 992 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 WBP11Q9Y2W2 641 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 GMEB1Q9Y692 573 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TDRD15B5MCY1 1934 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 DICER1Q9UPY3 1922 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FEZF1A0PJY2 475 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 SMIM30A4D0T7 59 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 POLR2IP36954 125 aaKnown RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 MAGEA10P43363 369 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ERVFC1P60507 584 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 NR1D2Q14995 579 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 GPR33Q49SQ1 333 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC44A4Q53GD3 710 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 AKIRIN2Q53H80 203 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 XKR7Q5GH72 579 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 FRRS1Q6ZNA5 592 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 CLIP4Q8N3C7 705 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ARL10Q8N8L6 244 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 PHOSPHO1Q8TCT1 267 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 HHIPL1Q96JK4 782 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF514Q96K75 400 aaPredicted RBP7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC22A12Q96S37 553 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF382Q96SR6 550 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 CCM2Q9BSQ5 444 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TAPBPLQ9BX59 468 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM138Q9NPI0 162 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC52A3Q9NQ40 469 aa7.96□□□□□ -1.13
PTPDC1-204ENST00000620992 CACNA1AO00555 2505 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 PITPNM1O00562 1244 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TMCC2O75069 709 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 NME6O75414 186 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 FHP07954 510 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TRAF3Q13114 568 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 NFE2L1Q14494 772 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SPANXN4Q5MJ08 99 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 GCNT6Q5T4J0 391 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TRIM73Q86UV7 250 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 THOC6Q86W42 341 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TERB1Q8NA31 727 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 RPLP0P6Q8NHW5 317 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 ZNF420Q8TAQ5 688 aaPredicted RBP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TRIB3Q96RU7 358 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 GSDMCQ9BYG8 508 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 FARSBQ9NSD9 589 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 KLRF1Q9NZS2 232 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 UTS2RQ9UKP6 389 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 M0QX08 132 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 PEX12O00623 359 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 PDPK1O15530 556 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 TNFRSF21O75509 655 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms