RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 CTPS2Q9NRF8 586 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ARL15Q9NXU5 204 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 FLRT1Q9NZU1 646 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 RAI2Q9Y5P3 530 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 DNAJC25-GNG10A0A024R161 153 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 GNG14A0A1W2PPG7 69 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 M0R233 179 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TOR1AO14656 332 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TLX2O43763 284 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ANXA8P13928 327 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TALDO1P37837 337 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 NDUFAF5Q5TEU4 345 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR2G6Q5TZ20 316 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TAPT1Q6NXT6 567 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TMEM81Q6P7N7 255 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TMEM145Q8NBT3 493 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR52P1PQ8NH57 321 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 LHFPL5Q8TAF8 219 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 KLHL6Q8WZ60 621 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 AP3S1Q92572 193 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 COQ10AQ96MF6 247 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 NELL2Q99435 816 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SAP130Q9H0E3 1048 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 HHATLQ9HCP6 504 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF304Q9HCX3 659 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 STUB1Q9UNE7 303 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SYNDIG1LA6NDD5 238 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR7A17O14581 309 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 GADD45GO95257 159 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TBX18O95935 607 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ALPPP05187 535 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SRCP12931 536 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 DRD5P21918 477 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ITPKAP23677 461 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 STOMP27105 288 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 HLA-DMAP28067 261 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TEKQ02763 1124 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 SREBF2Q12772 1141 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 EIF2B5Q13144 721 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ATP13A5Q4VNC0 1218 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 IDNKQ5T6J7 187 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF782Q6ZMW2 699 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 FBLIM1Q8WUP2 373 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 MARC2Q969Z3 335 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 OPALINQ96PE5 141 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 MTERF1Q99551 399 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 UQCC2Q9BRT2 126 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZMAT5Q9UDW3 170 aaKnown RBP9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 POFUT2Q9Y2G5 429 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 HS3ST4Q9Y661 456 aa9.39□□□□□ -0.91
TNFAIP3-210ENST00000620204 PITPNM1O00562 1244 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MRPS14O60783 128 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 FGF1P05230 155 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CTPS1P17812 591 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 FTMTQ8N4E7 242 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ZNF655Q8N720 491 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR2T35Q8NGX2 323 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ADGRE3Q9BY15 652 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 FAM126AQ9BYI3 521 aaPredicted RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 LINC00597Q9H2U6 94 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SERHL2Q9H4I8 314 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 WASH6PQ9NQA3 447 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SERHLQ9NQF3 203 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 KLHL1Q9NR64 748 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CPNE7Q9UBL6 633 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 TRAPPC4Q9Y296 219 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MAP4K5Q9Y4K4 846 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MAB21L2Q9Y586 359 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CFAP20Q9Y6A4 193 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 C2orf92A0A1B0GVN3 265 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 TMEM88BA6NKF7 163 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 TLR4O00206 839 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MANBAO00462 879 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC30A4O14863 429 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MMP3P08254 477 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 NR2F6P10588 404 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ANXA3P12429 323 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ETV1P50549 477 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 MAZP56270 477 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 ERVK-21P61565 698 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SEMG2Q02383 582 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 IHHQ14623 411 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 AFTPHQ6ULP2 937 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 IQCF1Q8N6M8 205 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 DENND6BQ8NEG7 585 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 OR5AK3PQ8NH89 298 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 SLC9A6Q92581 669 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 KCNN2Q9H2S1 579 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 IFT46Q9NQC8 304 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 TXNL4BQ9NX01 149 aaKnown RBP9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CCDC88CQ9P219 2028 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 RRN3P2A6NIE6 340 aa9.38□□□□□ -0.91
TNFAIP3-210ENST00000620204 CBX4O00257 560 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms