RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 ACAD8Q9UKU7 415 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 LAMA3Q16787 3333 aa12.52□□□□□ -0.41
SKP2-209ENST00000620197 ZNF670-ZNF695F2Z2N8 137 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 AP3D1O14617 1153 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 TPST2O60704 377 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ARAFP10398 606 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ALOX12P18054 663 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 AQP1P29972 269 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 RPS5P46782 204 aaKnown RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 GAS1P54826 345 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 SEMG2Q02383 582 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 CDH18Q13634 790 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 SCARB2Q14108 478 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 TSTQ16762 297 aaKnown RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 TIMM50Q3ZCQ8 353 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 MEDAGQ5VYS4 303 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 HTR3DQ70Z44 454 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 NRARPQ7Z6K4 114 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 STX19Q8N4C7 294 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 OR4A15Q8NGL6 344 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 HUS1BQ8NHY5 278 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 TMCO6Q96DC7 493 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 WRAP53Q9BUR4 548 aaKnown RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 NDEL1Q9GZM8 345 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 NUAK2Q9H093 628 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ATG10Q9H0Y0 220 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 TMEM202A6NGA9 273 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 CACNB4O00305 520 aaPredicted RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 ANXA4P09525 319 aaPredicted RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 RHCEP18577 417 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 IMPA1P29218 277 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 SOX6P35712 828 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 OR1E2P47887 323 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 OR2B6P58173 313 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 SPIBQ01892 262 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 IRF8Q02556 426 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ACSM2AQ08AH3 577 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ASAH1Q13510 395 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 XKR6Q5GH73 641 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 GCNT6Q5T4J0 391 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ACSM2BQ68CK6 577 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 FAM71E1Q6IPT2 247 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 DDX53Q86TM3 631 aaKnown RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 LRRC56Q8IYG6 542 aaPredicted RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 OXR1Q8N573 874 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 FBXO15Q8NCQ5 510 aaPredicted RBP12.51□□□□□ -0.41
SKP2-209ENST00000620197 NEDD4LQ96PU5 975 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 ICKQ9UPZ9 632 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 PCDHB7Q9Y5E2 793 aa12.51□□□□□ -0.41
SKP2-209ENST00000620197 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 HYKKA2RU49 373 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CENPBD1B2RD01 187 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 GPR37L1O60883 481 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CSO75390 466 aaKnown RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 CCNKO75909 580 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CTSOP43234 321 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 FLT3LGP49771 235 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CRISP1P54107 249 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 LIM2P55344 173 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 DEFA1P59665 94 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 DEFA3P59666 94 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CDK10Q15131 360 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 BAK1Q16611 211 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ZNF630Q2M218 657 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 TPGS2Q68CL5 300 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 RGMBQ6NW40 437 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 USP45Q70EL2 814 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 BTN2A2Q8WVV5 523 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 SUV39H2Q9H5I1 410 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ZNF334Q9HCZ1 680 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 MYNNQ9NPC7 610 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ERVK13-1Q9NX77 482 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CRNNQ9UBG3 495 aaPredicted RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 ENOPH1Q9UHY7 261 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 SLC5A10A0PJK1 596 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 A8MX80 341 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 OPN1SWP03999 348 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CSTF2P33240 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
SKP2-209ENST00000620197 PLD1Q13393 1074 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CCSMST1Q4G0I0 132 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 RDH10Q8IZV5 341 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 SIMC1Q8NDZ2 872 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 TTC16Q8NEE8 873 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 NFKBIDQ8NI38 313 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
SKP2-209ENST00000620197 SOSTQ9BQB4 213 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 ZNF221Q9UK13 617 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 A0A0B4J293 547 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 TSPAN11A1L157 253 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 CCNB2O95067 398 aa12.5□□□□□ -0.41
SKP2-209ENST00000620197 HLA-DQB1P01920 261 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms