RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CPXM2Q8N436 756 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 OR56A3Q8NH54 315 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 CXorf40BQ96DE9 158 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 MAPKAP1Q9BPZ7 522 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 TAPBPLQ9BX59 468 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 CPEB1Q9BZB8 566 aaKnown RBP19.52■□□□□ 0.72
NEK3-208ENST00000618534 TBC1D24Q9ULP9 559 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 PCM1Q15154 2024 aa19.52■□□□□ 0.72
NEK3-208ENST00000618534 SH3D21A4FU49 640 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 PTPN2P17706 415 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 BCL7AQ4VC05 210 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 ARMCX6Q7L4S7 300 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 OXR1Q8N573 874 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.52■□□□□ 0.71
NEK3-208ENST00000618534 AUTS2Q8WXX7 1259 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 LMLNQ96KR4 655 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 OPALINQ96PE5 141 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 VPS35Q96QK1 796 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 CCDC32Q9BV29 185 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 SMURF1Q9HCE7 757 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 CLN6Q9NWW5 311 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 RAB23Q9ULC3 237 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 ENPP4Q9Y6X5 453 aa19.52■□□□□ 0.71
NEK3-208ENST00000618534 PDZK1P1A8MUH7 402 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 FADS2P1A8MWK0 482 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 POP4O95707 220 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 CATP04040 527 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 ZNF24P17028 368 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 TNFSF8P32971 234 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 CHI3L1P36222 383 aaPredicted RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 ETV3P41162 512 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 CTSCP53634 463 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 OR2B6P58173 313 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 LRRC26Q2I0M4 334 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 CRB2Q5IJ48 1285 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 MED27Q6P2C8 311 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 SLCO4C1Q6ZQN7 724 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 HTR3DQ70Z44 454 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.51■□□□□ 0.71
NEK3-208ENST00000618534 RAVER1Q8IY67 606 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 OR8H2Q8N162 312 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 TMEM159Q96B96 161 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 TRNT1Q96Q11 434 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 TPK1Q9H3S4 243 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 NMNAT1Q9HAN9 279 aaPredicted RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 KIAA1671Q9BY89 1806 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 TRBC2A0A5B9 178 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 NPC1O15118 1278 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 AP2A2O94973 939 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 RECKO95980 971 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 FURINP09958 794 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 HMGA2P52926 109 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 CRISP1P54107 249 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 NDUFA5Q16718 116 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 TRIM40Q6P9F5 258 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 MMAAQ8IVH4 418 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 ZNF513Q8N8E2 541 aaPredicted RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 LMNTD1Q8N9Z9 388 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 WDR48Q8TAF3 677 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 PPCDCQ96CD2 204 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 IL4I1Q96RQ9 567 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 CNPPD1Q9BV87 410 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 EXOSC4Q9NPD3 245 aaKnown RBP19.51■□□□□ 0.71
NEK3-208ENST00000618534 C11orf16Q9NQ32 467 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 SH2B3Q9UQQ2 575 aa19.51■□□□□ 0.71
NEK3-208ENST00000618534 H3BM21 787 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 CYP7B1O75881 506 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 SOD2P04179 222 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 KRT8P05787 483 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 GABRR2P28476 465 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 SOAT1P35610 550 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 SOX3P41225 446 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 GJA8P48165 433 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 PCDH1Q08174 1060 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 PRSS53Q2L4Q9 553 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 LEXMQ3ZCV2 418 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 IER5LQ5T953 404 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 NXNL2Q5VZ03 156 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 FRMPD2BQ6IN97 320 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 TMC5Q6UXY8 1006 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 SLC44A2Q8IWA5 706 aaPredicted RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 KLHDC8AQ8IYD2 350 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 OR2A14Q96R47 310 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 RIOK2Q9BVS4 552 aaKnown RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 MARCH7Q9H992 704 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 HHATLQ9HCP6 504 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 MRPL17Q9NRX2 175 aaKnown RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 CRNNQ9UBG3 495 aaPredicted RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 WBP11Q9Y2W2 641 aaKnown RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 A0A075B6Q4 140 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 GPR37L1O60883 481 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 ENTPD6O75354 484 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 PCBP3P57721 371 aaKnown RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 C2orf80Q0P641 193 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 TSTA3Q13630 321 aaPredicted RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 ZNF630Q2M218 657 aaPredicted RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 NRARPQ7Z6K4 114 aa19.5■□□□□ 0.71
NEK3-208ENST00000618534 VANGL1Q8TAA9 524 aaPredicted RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 WRAP53Q9BUR4 548 aaKnown RBP19.5■□□□□ 0.71
NEK3-208ENST00000618534 ASPNQ9BXN1 380 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms