RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CACNG1Q06432 222 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 GAB1Q13480 694 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SPHARQ15513 63 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 CRTC2Q53ET0 693 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 YIF1BQ5BJH7 314 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 KRT73Q86Y46 540 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 ZNF683Q8IZ20 524 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 ART5Q96L15 291 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 CCDC32Q9BV29 185 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 ERVW-1Q9UQF0 538 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 V9GYH0 126 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 ISM1B1AKI9 464 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 B8ZZF3 427 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 PLK4O00444 970 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 GASTP01350 101 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 MC1RQ01726 317 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 HYAL2Q12891 473 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 OR2G6Q5TZ20 316 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 FAHD1Q6P587 224 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 C1orf52Q8N6N3 182 aaKnown RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 POF1BQ8WVV4 589 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 OTUB1Q96FW1 271 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 C7orf34Q96L11 122 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 OPALINQ96PE5 141 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SAV1Q9H4B6 383 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 HHATLQ9HCP6 504 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 GRIP1Q9Y3R0 1128 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 TRAV6A0A075B6T7 132 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 MBLAC1A4D2B0 266 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 MYADML2A6NDP7 307 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 GSTM1P09488 218 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SLC2A2P11168 524 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 POLR2CP19387 275 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 ITGALP20701 1170 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 CHI3L1P36222 383 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 YBEYP58557 167 aaPredicted RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 MRPS6P82932 125 aaKnown RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 ABRQ12979 859 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 POU4F3Q15319 338 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 P2RY14Q15391 338 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 FBXO43Q4G163 708 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 TOR2AQ5JU69 321 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 CPTPQ5TA50 214 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 CST9Q5W186 159 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 DEF8Q6ZN54 512 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 DOHHQ9BU89 302 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 PPIL3Q9H2H8 161 aaKnown RBP12.63□□□□□ -0.39
MSH6-214ENST00000616033 TBC1D17Q9HA65 648 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SLC23A1Q9UHI7 598 aa12.63□□□□□ -0.39
MSH6-214ENST00000616033 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ANXA4P09525 319 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 HTR7P34969 479 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 LRIF1Q5T3J3 769 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 VWA5B2Q8N398 1253 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 PARK7Q99497 189 aaKnown RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 MGME1Q9BQP7 344 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ZFYVE1Q9HBF4 777 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 MBD1Q9UIS9 605 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 OARD1Q9Y530 152 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 PCDHGA2Q9Y5H1 932 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ARPC4-TTLL3A0A0A6YYG9 625 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 WASH4PA8MWX3 477 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 SSTR2P30874 369 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 CRYBA2P53672 197 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 INSL4Q14641 139 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ATP13A5Q4VNC0 1218 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SAXO2Q658L1 398 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 OLIG3Q7RTU3 272 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 C11orf65Q8NCR3 313 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 GATAD2BQ8WXI9 593 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 RACGAP1Q9H0H5 632 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 GABARAPL1Q9H0R8 117 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ATP13A2Q9NQ11 1180 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ZMAT5Q9UDW3 170 aaKnown RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 PCDHGB2Q9Y5G2 931 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 MKI67P46013 3256 aaKnown RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 CASKO14936 926 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 TOXO94900 526 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SYPP08247 313 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 PRPS2P11908 318 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 TYMPP19971 482 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 CHMP24386 653 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 RHAGQ02094 409 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SNAPC1Q16533 368 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 RPS26P11Q5JNZ5 115 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 FRG2Q64ET8 278 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 TRIM46Q7Z4K8 759 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SERPINA11Q86U17 422 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 RBFAQ8N0V3 343 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 Q8N402 240 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 C2orf73Q8N5S3 287 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms