RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 NUFIP1Q9UHK0 495 aaKnown RBP10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RPS6KA6Q9UK32 745 aa10.42□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TTC34A8MYJ7 566 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RNASET2O00584 256 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SCAMP2O15127 329 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TBX19O60806 448 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 KCNK5O95279 499 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ERGP11308 486 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TEAD1P28347 426 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IMPA1P29218 277 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ELP6Q0PNE2 266 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 KEAP1Q14145 624 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HKDC1Q2TB90 917 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LAIR1Q6GTX8 287 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SLCO4C1Q6ZQN7 724 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 Q6ZVL8 140 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CBLL1Q75N03 491 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF551Q7Z340 670 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 B3GNT8Q7Z7M8 397 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZZZ3Q8IYH5 903 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NETO1Q8TDF5 533 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DPH2Q9BQC3 489 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZCCHC2Q9C0B9 1178 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 BHLHE41Q9C0J9 482 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SAMHD1Q9Y3Z3 626 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PCDHB11Q9Y5F2 797 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 A0A0C4DFX4 3053 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DYRK3O43781 588 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 C1orf105O95561 183 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TACR1P25103 407 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LIPAP38571 399 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RPL3P39023 403 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ETV3P41162 512 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RPA4Q13156 261 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DOC2AQ14183 400 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF404Q494X3 552 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZNF691Q5VV52 312 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SYCE2Q6PIF2 218 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UNC5DQ6UXZ4 953 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 LINC00299Q6ZSB3 139 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CEP68Q76N32 757 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 NRARPQ7Z6K4 114 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ASCC1Q8N9N2 400 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TRNT1Q96Q11 434 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PSD2Q9BQI7 771 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PITHD1Q9GZP4 211 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UCKL1Q9NWZ5 548 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TOR4AQ9NXH8 423 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GULP1Q9UBP9 304 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VEGFDO43915 354 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ADH1CP00326 375 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 OPN1SWP03999 348 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CYP17A1P05093 508 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IFNA8P32881 189 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DCTP40126 519 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PIK3CBP42338 1070 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ALDH6A1Q02252 535 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CAMK2BQ13554 666 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VMACQ2NL98 169 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GAB4Q2WGN9 574 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IQCCQ4KMZ1 466 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PAMR1Q6UXH9 720 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EIF3MQ7L2H7 374 aaKnown RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GDPD3Q7L5L3 318 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ELMOD2Q8IZ81 293 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VANGL1Q8TAA9 524 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 MUL1Q969V5 352 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TMEM159Q96B96 161 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PPP1R16AQ96I34 528 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PKP4Q99569 1192 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 INPP5KQ9BT40 448 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 QPCTLQ9NXS2 382 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 VNN3Q9NY84 501 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TMEFF2Q9UIK5 374 aaPredicted RBP10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PCDHGA10Q9Y5H3 936 aa10.41□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 H3BM21 787 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 RFXANKO14593 260 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZW10O43264 779 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DDX5P17844 614 aaKnown RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 GSTM5P46439 218 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 DGKGP49619 791 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 PPP5CP53041 499 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IRF8Q02556 426 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ZMAT1Q5H9K5 638 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ATAD3CQ5T2N8 411 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TTC29Q8NA56 475 aaPredicted RBP10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 SCAMP4Q969E2 229 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TMEM203Q969S6 136 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EFCAB11Q9BUY7 163 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 HDAC8Q9BY41 377 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 TPRKBQ9Y3C4 175 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EDDM13A0A1B0GTR0 161 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 EVPLLA8MZ36 301 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 UPK1BO75841 260 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ADH5P11766 374 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 JUNDP17535 347 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ITIH1P19827 911 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 CXCR2P25025 360 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 ACADLP28330 430 aa10.4□□□□□ -0.74
SENP3-EIF4A1-201ENST00000614237 IRS1P35568 1242 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms