RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 ZNF717Q9BY31 904 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 INMT-MINDY4F8WBC2 141 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 PRKYO43930 277 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF41P51814 821 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 CAPZA1P52907 286 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM53Q6P2H8 277 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 GLS2Q9UI32 602 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 RNF11Q9Y3C5 154 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 NOX1Q9Y5S8 564 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 C13orf42A0A1B0GVH6 325 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 PROM1O43490 865 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 AK1P00568 194 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 IL7P13232 177 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 RAB39AQ14964 217 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 CTC1Q2NKJ3 1217 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 EMC10Q5UCC4 262 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 LRRN1Q6UXK5 716 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 ZNF675Q8TD23 568 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 LAMP5Q9UJQ1 280 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 PCDHB14Q9Y5E9 798 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 A0A1W2PPW3 197 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC33A1O00400 549 aaPredicted RBP16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TYROBPO43914 113 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 VAMP1P23763 118 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 HERV-K104P61576 105 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 HNRNPA0Q13151 305 aaKnown RBP16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 TXNRD3NBQ6F5E7 133 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 PRSS58Q8IYP2 241 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 FANK1Q8TC84 345 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 CCDC106Q9BWC9 280 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 MEAF6Q9HAF1 191 aa16.8■□□□□ 0.28
HMGXB3-206ENST00000613459 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 POU6F2P78424 691 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 OGDHQ02218 1023 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 RAB11FIP2Q7L804 512 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 OR5J2Q8NH18 312 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 CCDC120Q96HB5 630 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 HS6ST2Q96MM7 605 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 GKN1Q9NS71 199 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM184CQ9NVA4 438 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 KLRF1Q9NZS2 232 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 C9IYK1 514 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 E7EQ34 232 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 RPP14O95059 124 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 SUOXP51687 545 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 GJA9P57773 515 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 KCTD18Q6PI47 426 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 Q6ZVU0 165 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 THEM6Q8WUY1 208 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 SMURF1Q9HCE7 757 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 ASB6Q9NWX5 421 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 CNOT11Q9UKZ1 510 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 KLK3P07288 261 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 ITGA5P08648 1049 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 SMOQ99835 787 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 CCM2LQ9NUG4 571 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 ABCC6O95255 1503 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 A0A0G2JN53 185 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 B4DGG1 531 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 HCKP08631 526 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 RABGGTBP53611 331 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 PRKCZQ05513 592 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 TUBB3Q13509 450 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 MSS51Q4VC12 460 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 ARHGAP40Q5TG30 622 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 XKR5Q6UX68 686 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 DCDC5Q6ZRR9 648 aa16.79■□□□□ 0.28
HMGXB3-206ENST00000613459 TEX13DA0A0J9YY54 714 aaPredicted RBP16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 BOLA2-SMG1P6H3BVE0 249 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 ARHGEF15O94989 841 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 LATS1O95835 1130 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 SOX9P48436 509 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 CTBP2P56545 445 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 CHAF1BQ13112 559 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 HSDL2Q6YN16 418 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 TRAM1L1Q8N609 369 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 MCHR1Q99705 422 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM14AQ9Y6G1 99 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 VNN2O95498 520 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 LSAMPQ13449 338 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 GAS6Q14393 721 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 RAB30Q15771 203 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 LRRC73Q5JTD7 316 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 TMED4Q7Z7H5 227 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 RNF130Q86XS8 419 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 MARVELD2Q8N4S9 558 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 MFSD2AQ8NA29 543 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 OR4K14Q8NGD5 310 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 PLEKHO2Q8TD55 490 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 TMEM45AQ9NWC5 275 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 SERTAD3Q9UJW9 196 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 SH3D21A4FU49 640 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 MECP2P51608 486 aaKnown RBP16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 PLGLB1Q02325 96 aa16.78■□□□□ 0.28
HMGXB3-206ENST00000613459 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms