RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 CDC40O60508 579 aaKnown RBP eCLIP13.76□□□□□ -0.214e-6■■□□□ 12.3
FDPS-221ENST00000612683 ITGA10O75578 1167 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 CLEC3AO75596 197 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 ZFAND5O76080 213 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 CCDC166P0CW27 439 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 PPP2R1BP30154 601 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 PTGER1P34995 402 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 RPL21P46778 160 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 HSD17B7P56937 341 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 RAB38P57729 211 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 BMPR2Q13873 1038 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 TRIM40Q6P9F5 258 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 GPSM1Q86YR5 675 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 CHERPQ8IWX8 916 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 SCUBE1Q8IWY4 988 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 EID3Q8N140 333 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 CYP4Z2PQ8N1L4 340 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 ARMC10Q8N2F6 343 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 SNX31Q8N9S9 440 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 FAM47BQ8NA70 645 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 PYROXD1Q8WU10 500 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 NCLNQ969V3 563 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 ESAMQ96AP7 390 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 VMP1Q96GC9 406 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 QRFPRQ96P65 431 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 KRT12Q99456 494 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 NAPGQ99747 312 aaPredicted RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 DERL2Q9GZP9 239 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 REXO4Q9GZR2 422 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 CNOT10Q9H9A5 744 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 CAB39LQ9H9S4 337 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 PRM3Q9NNZ6 103 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 SMYD2Q9NRG4 433 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 DNAJC11Q9NVH1 559 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 GPRC5BQ9NZH0 403 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 TXNDC16Q9P2K2 825 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 ERVK-11Q9UQG0 969 aa13.76□□□□□ -0.21
FDPS-221ENST00000612683 MRPS33Q9Y291 106 aaKnown RBP13.76□□□□□ -0.21
FDPS-221ENST00000612683 A0A1B0GTH9 108 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 MYOCOSA0A1B0GUC4 107 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 E9PLN8 166 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 HS6ST1O60243 411 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 PDE9AO76083 593 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 IFNA16P05015 189 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 TPOP07202 933 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 GSTM2P28161 218 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SSTR1P30872 391 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 PTGS2P35354 604 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 KIR3DL1P43629 444 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 HSPA7P48741 367 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SSR4P51571 173 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 HNRNPFP52597 415 aaKnown RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 GPR85P60893 370 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 MRPS25P82663 173 aaKnown RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 ILF2Q12905 390 aaKnown RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 TERF2Q15554 542 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 XKR6Q5GH73 641 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SULT1C3Q6IMI6 304 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 MDGA2Q7Z553 956 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 FGD2Q7Z6J4 655 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 CLNKQ7Z7G1 428 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 ZNF595Q8IYB9 648 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 TCAIMQ8N3R3 496 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 TMEM132CQ8N3T6 1108 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 TMEM52Q8NDY8 209 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 PHF10Q8WUB8 498 aaKnown RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 CDKL2Q92772 493 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SDCCAG3Q96C92 435 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 TSPAN17Q96FV3 270 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SEC16BQ96JE7 1060 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 VKORC1Q9BQB6 163 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 PITHD1Q9GZP4 211 aaPredicted RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 COPS7BQ9H9Q2 264 aaPredicted RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 GRPEL1Q9HAV7 217 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 CD274Q9NZQ7 290 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 KCMF1Q9P0J7 381 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 ZNF223Q9UK11 482 aaPredicted RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 ZNF490Q9ULM2 529 aaPredicted RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 PPT2Q9UMR5 302 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 YARS2Q9Y2Z4 477 aaKnown RBP13.75□□□□□ -0.21
FDPS-221ENST00000612683 ABCA12Q86UK0 2595 aa13.75□□□□□ -0.21
FDPS-221ENST00000612683 CXorf49A8MYA2 514 aaPredicted RBP13.74□□□□□ -0.21
FDPS-221ENST00000612683 TGFBR3LH3BV60 316 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 ADAM10O14672 748 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 PHGDHO43175 533 aaKnown RBP13.74□□□□□ -0.21
FDPS-221ENST00000612683 STK16O75716 305 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 GGT5P36269 586 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 GPR143P51810 404 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 MTTPP55157 894 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 LIM2P55344 173 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 TGM3Q08188 693 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 DOC2AQ14183 400 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 RCN2Q14257 317 aa13.74□□□□□ -0.21
FDPS-221ENST00000612683 HIST2H2ACQ16777 129 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms