RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TBC1D1Q86TI0 1168 aaPredicted RBP16.24■□□□□ 0.19
PRKN-209ENST00000612485 SCUBE1Q8IWY4 988 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 NFAM1Q8NET5 270 aaPredicted RBP16.24■□□□□ 0.19
PRKN-209ENST00000612485 EXT2Q93063 718 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 QRFPRQ96P65 431 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 SERINC2Q96SA4 455 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 HES7Q9BYE0 225 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 DEFB126Q9BYW3 111 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 CD244Q9BZW8 370 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 COPS7BQ9H9Q2 264 aaPredicted RBP16.24■□□□□ 0.19
PRKN-209ENST00000612485 NMRAL1Q9HBL8 299 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 PRTFDC1Q9NRG1 225 aa16.24■□□□□ 0.19
PRKN-209ENST00000612485 PRAMEF4O60810 478 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 FAM155BO75949 473 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 NEURL1O76050 574 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 MYO1DO94832 1006 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 TFEBP19484 476 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 CYB561P49447 251 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 CLCN2P51788 898 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 MTTPP55157 894 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 CASP6P55212 293 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 IRF8Q02556 426 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 SRSF11Q05519 484 aaKnown RBP16.23■□□□□ 0.19
PRKN-209ENST00000612485 CKAP4Q07065 602 aaKnown RBP16.23■□□□□ 0.19
PRKN-209ENST00000612485 SLC13A2Q13183 592 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 TBCCQ15814 346 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 KRTCAP3Q53RY4 240 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 PRAMEF9Q5VWM5 478 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 MTFR2Q6P444 385 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 ABHD17CQ6PCB6 329 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 GALNTL5Q7Z4T8 443 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 VN1R5Q7Z5H4 357 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 CMC1Q7Z7K0 106 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 ZNF595Q8IYB9 648 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 B3GNT7Q8NFL0 401 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 UBE2E3Q969T4 207 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 ALG9Q9H6U8 611 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 PRM3Q9NNZ6 103 aa16.23■□□□□ 0.19
PRKN-209ENST00000612485 ZNF490Q9ULM2 529 aaPredicted RBP16.23■□□□□ 0.19
PRKN-209ENST00000612485 NOTCH2Q04721 2471 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 SUPT3HB4E1H0 165 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 KERAO60938 352 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 SUPT3HO75486 399 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 SLC25A12O75746 678 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 TBX6O95947 436 aaPredicted RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 LTA4HP09960 611 aaKnown RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 SLC35E2BP0CK96 405 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 TRHRP34981 398 aaPredicted RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 CA7P43166 264 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 CHIT1Q13231 466 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 TRADDQ15628 312 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 MAPKAPK3Q16644 382 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 ZNF468Q5VIY5 522 aaPredicted RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 CCDC91Q7Z6B0 441 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 ISCA2Q86U28 154 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 SLC34A3Q8N130 599 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 ARMC10Q8N2F6 343 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 FAM47BQ8NA70 645 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 SRFBP1Q8NEF9 429 aaKnown RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 THAP3Q8WTV1 239 aaPredicted RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 TMEM125Q96AQ2 219 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 VMP1Q96GC9 406 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 GPR137Q96N19 417 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 FRMD6Q96NE9 622 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 ROGDIQ9GZN7 287 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 TRIM45Q9H8W5 580 aaPredicted RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 PNO1Q9NRX1 252 aaKnown RBP16.22■□□□□ 0.19
PRKN-209ENST00000612485 DAPP1Q9UN19 280 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 CROCCQ5TZA2 2017 aa16.22■□□□□ 0.19
PRKN-209ENST00000612485 TRBV11-1A0A0K0K1C0 115 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 CCL21O00585 134 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 NME2P1O60361 137 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 CD22P20273 847 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 NME2P22392 152 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 CERS1P27544 350 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 CASP2P42575 452 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 KCNC1P48547 511 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 HLCSP50747 726 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 LIM2P55344 173 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 GUCY2DQ02846 1103 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 DLG1Q12959 904 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 ADNP2Q6IQ32 1131 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.21■□□□□ 0.19
PRKN-209ENST00000612485 APCDD1LQ8NCL9 501 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 UBTD2Q8WUN7 234 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 MAGED4Q96JG8 741 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 KCNC2Q96PR1 638 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 F2RL3Q96RI0 385 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 ATOH8Q96SQ7 321 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 CCDC77Q9BR77 488 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 ADAP2Q9NPF8 381 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 OPTCQ9UBM4 332 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 FBXW2Q9UKT8 454 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 PPIEQ9UNP9 301 aaKnown RBP16.21■□□□□ 0.19
PRKN-209ENST00000612485 ACOT9Q9Y305 439 aa16.21■□□□□ 0.19
PRKN-209ENST00000612485 TEX15Q9BXT5 2789 aa16.2■□□□□ 0.18
PRKN-209ENST00000612485 A0A087X1B8 175 aa16.2■□□□□ 0.18
PRKN-209ENST00000612485 CCDC189A1A4V9 331 aa16.2■□□□□ 0.18
PRKN-209ENST00000612485 SYCE1LA8MT33 242 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms