RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 MTTPP55157 894 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 RAB38P57729 211 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 PFKFB4Q16877 469 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 MED27Q6P2C8 311 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 RELL1Q8IUW5 271 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 TEX9Q8N6V9 391 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 CEP112Q8N8E3 955 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
IRF3-224ENST00000599680 KCNC2Q96PR1 638 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 BARD1Q99728 777 aaKnown RBP13.44□□□□□ -0.26
IRF3-224ENST00000599680 PRTFDC1Q9NRG1 225 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
IRF3-224ENST00000599680 ZNF490Q9ULM2 529 aaPredicted RBP13.44□□□□□ -0.26
IRF3-224ENST00000599680 SPACA6W5XKT8 324 aa13.44□□□□□ -0.26
IRF3-224ENST00000599680 SAGE2PA6NJ88 616 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 PRAMEF4O60810 478 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 KRT38O76015 456 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 DDAH2O95865 285 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 CRYABP02511 175 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 ALDOAP04075 364 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 CD22P20273 847 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 SERPINB1P30740 379 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ARL1P40616 181 aaPredicted RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 CASP2P42575 452 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ALDH18A1P54886 795 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 HSD17B7P56937 341 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 PHEXP78562 749 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 OC90Q02509 493 aaPredicted RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 DDX39BQ13838 428 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 RUNX2Q13950 521 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 SETDB1Q15047 1291 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ADPRMQ3LIE5 342 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ZNF766Q5HY98 468 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 PRAMEF9Q5VWM5 478 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ADNP2Q6IQ32 1131 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ABHD17CQ6PCB6 329 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 CHSY3Q70JA7 882 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 VN1R5Q7Z5H4 357 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ZNF595Q8IYB9 648 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 HORMAD2Q8N7B1 307 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 SCYL1Q96KG9 808 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 QRFPRQ96P65 431 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 F2RL3Q96RI0 385 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 CENPKQ9BS16 269 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 DEFB126Q9BYW3 111 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 CDCP1Q9H5V8 836 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ACTR8Q9H981 624 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 NECTIN3Q9NQS3 549 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 PNO1Q9NRX1 252 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 SLC5A6Q9Y289 635 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 ASB1Q9Y576 335 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 TNPO3Q9Y5L0 923 aaKnown RBP13.43□□□□□ -0.26
IRF3-224ENST00000599680 ICE1Q9Y2F5 2266 aa13.43□□□□□ -0.26
IRF3-224ENST00000599680 DIDO1Q9BTC0 2240 aaKnown RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 A0A087WUV0 522 aaPredicted RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 SYNDIG1LA6NDD5 238 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 GABRR3A8MPY1 467 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 SH3BGRLO75368 114 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 CD46P15529 392 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 EPORP19235 508 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 CNTFP26441 200 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 SSR2P43308 183 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 PIK3CGP48736 1102 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 TUBA3CQ13748 450 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 NAA30Q147X3 362 aaPredicted RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 AP5B1Q2VPB7 878 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 TMEM35AQ53FP2 167 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 UBAP2Q5T6F2 1119 aaKnown RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 TUBA3EQ6PEY2 450 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 RPS19BP1Q86WX3 136 aaKnown RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 LGI4Q8N135 537 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 KIF2BQ8N4N8 673 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 DNAJB8Q8NHS0 232 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 UHMK1Q8TAS1 419 aaKnown RBP13.42□□□□□ -0.26
IRF3-224ENST00000599680 ELP5Q8TE02 316 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 SLC44A1Q8WWI5 657 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 REPS1Q96D71 796 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 CCDC77Q9BR77 488 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 MS4A8Q9BY19 250 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 ANKRD10Q9NXR5 420 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 ADGRE2Q9UHX3 823 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 DAPP1Q9UN19 280 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 OSGIN2Q9Y236 505 aa13.42□□□□□ -0.26
IRF3-224ENST00000599680 HMX2A2RU54 273 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 E2F3O00716 465 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 FCHO1O14526 889 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 SMIM24O75264 130 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 MYO1DO94832 1006 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 TGFB1P01137 390 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 IFNA16P05015 189 aa13.41□□□□□ -0.26
IRF3-224ENST00000599680 RBP1P09455 135 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms