RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NCLNQ969V3 563 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 VMP1Q96GC9 406 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 NPLQ9BXD5 320 aaPredicted RBP19.09■□□□□ 0.65
TRIM47-207ENST00000593089 CAB39LQ9H9S4 337 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 POPDC3Q9HBV1 291 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 SMYD2Q9NRG4 433 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 NSMCE4AQ9NXX6 385 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 WWOXQ9NZC7 414 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 SNX24Q9Y343 169 aa19.09■□□□□ 0.65
TRIM47-207ENST00000593089 A0A1B0GTH9 108 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 ANKDD1BA6NHY2 528 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 E7ESA3 106 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 E9PLN8 166 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 CLDN4O14493 209 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 B3GALT2O43825 422 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 HS6ST1O60243 411 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 CDC40O60508 579 aaKnown RBP eCLIP19.08■□□□□ 0.64
TRIM47-207ENST00000593089 KIR3DL1P43629 444 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 PLA2G16P53816 162 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 HSD17B7P56937 341 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 GPR85P60893 370 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 TERF2Q15554 542 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 MDGA2Q7Z553 956 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 CLNKQ7Z7G1 428 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 PHF10Q8WUB8 498 aaKnown RBP19.08■□□□□ 0.64
TRIM47-207ENST00000593089 QRFPRQ96P65 431 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 VKORC1Q9BQB6 163 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 CCDC77Q9BR77 488 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 TMEM79Q9BSE2 394 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 MCMBPQ9BTE3 642 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 PPT2Q9UMR5 302 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 MTO1Q9Y2Z2 717 aaKnown RBP19.08■□□□□ 0.64
TRIM47-207ENST00000593089 CLDN16Q9Y5I7 305 aa19.08■□□□□ 0.64
TRIM47-207ENST00000593089 A0A088AWK7 358 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 ADAM10O14672 748 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 TAPBPO15533 448 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 PRKNO60260 465 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 CLEC3AO75596 197 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 TPOP07202 933 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 ZNF10P21506 573 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 GSTM2P28161 218 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 RPL21P46778 160 aaKnown RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 GNG11P61952 73 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 ADNP2Q6IQ32 1131 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 TRIM40Q6P9F5 258 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 C16orf47Q6ZP98 133 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 VN1R5Q7Z5H4 357 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 ZNF295-AS1Q8N0V1 137 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 EID3Q8N140 333 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 OR2L5Q8NG80 312 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 SREK1Q8WXA9 508 aaKnown RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 ESAMQ96AP7 390 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 DMRTA2Q96SC8 542 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 CAPS2Q9BXY5 557 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 DERL2Q9GZP9 239 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 REXO4Q9GZR2 422 aaKnown RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 NT5DC2Q9H857 520 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 COPS7BQ9H9Q2 264 aaPredicted RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 LIN28AQ9H9Z2 209 aaKnown RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 DNAJC11Q9NVH1 559 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 GPRC5BQ9NZH0 403 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 MRPS33Q9Y291 106 aaKnown RBP19.07■□□□□ 0.64
TRIM47-207ENST00000593089 SAR1BQ9Y6B6 198 aa19.07■□□□□ 0.64
TRIM47-207ENST00000593089 CSMD2Q7Z408 3487 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 MYOCOSA0A1B0GUC4 107 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CCDC188H7C350 402 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CLGNO14967 610 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 PHGDHO43175 533 aaKnown RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 TBX6O95947 436 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 POU3F2P20265 443 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CERS1P27544 350 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 PTGS2P35354 604 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 HSPA7P48741 367 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 SSR4P51571 173 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 GPR143P51810 404 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 MRPS25P82663 173 aaKnown RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 POU4F1Q01851 419 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CD163Q86VB7 1156 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 ZNF595Q8IYB9 648 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 TCAIMQ8N3R3 496 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 SNX31Q8N9S9 440 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 FAM57AQ8TBR7 257 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 SDCCAG3Q96C92 435 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 SERINC2Q96SA4 455 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CSF3RQ99062 836 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 KRT12Q99456 494 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 NAPGQ99747 312 aaPredicted RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 CNOT10Q9H9A5 744 aaKnown RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 ADAP2Q9NPF8 381 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 KCMF1Q9P0J7 381 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 PPIEQ9UNP9 301 aaKnown RBP19.06■□□□□ 0.64
TRIM47-207ENST00000593089 ERVK-11Q9UQG0 969 aa19.06■□□□□ 0.64
TRIM47-207ENST00000593089 PDZD2O15018 2839 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 PRAMEF4O60810 478 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 ZFAND5O76080 213 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 WISP3O95389 354 aaPredicted RBP19.05■□□□□ 0.64
TRIM47-207ENST00000593089 IFNA16P05015 189 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 CCDC166P0CW27 439 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 TFEBP19484 476 aa19.05■□□□□ 0.64
TRIM47-207ENST00000593089 SSTR1P30872 391 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms