RNA–Protein interactions for RNA: ENST00000589863.5

SAFB-207, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 2,708 nt, Biotype nonsense mediated decay, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-207ENST00000589863 ERVK13-1Q9NX77 482 aa16.24■□□□□ 0.19
SAFB-207ENST00000589863 TRAV19A0A0A6YYK7 116 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 SLC5A10A0PJK1 596 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 ZW10O43264 779 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 SOX14O95416 240 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 TIMP2P16035 220 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 NPPBP16860 134 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 CNR2P34972 360 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 LIMK1P53667 647 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 UGT2B15P54855 530 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 EEF1A2Q05639 463 aaKnown RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 ZNF181Q2M3W8 571 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 CCBE1Q6UXH8 406 aaPredicted RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.23■□□□□ 0.19
SAFB-207ENST00000589863 BTN2A2Q8WVV5 523 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 PPCDCQ96CD2 204 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 MGLLQ99685 303 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 RSPO3Q9BXY4 272 aaPredicted RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 NXF2Q9GZY0 626 aaKnown RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 C11orf16Q9NQ32 467 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 USP34Q70CQ2 3546 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 TRBC2A0A5B9 178 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 ISPDA4D126 451 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 H3BM21 787 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 GADD45GO95257 159 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 PCSK2P16519 638 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 CHMP24386 653 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 PIK3CBP42338 1070 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 RECQLP46063 649 aaPredicted RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 XCR1P46094 333 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 IRF3Q14653 427 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 SF3B4Q15427 424 aaKnown RBP eCLIP16.23■□□□□ 0.193e-8■■■■■ 40.4
SAFB-207ENST00000589863 AKAP14Q86UN6 197 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 ADIPOR2Q86V24 386 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 DENND6BQ8NEG7 585 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 KBTBD8Q8NFY9 601 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 C16orf78Q8WTQ4 265 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 RAD9AQ99638 391 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 WRAP53Q9BUR4 548 aaKnown RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 CEP44Q9C0F1 390 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 BHLHE41Q9C0J9 482 aaPredicted RBP16.23■□□□□ 0.19
SAFB-207ENST00000589863 ANKHQ9HCJ1 492 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 ATP6V1HQ9UI12 483 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 PCDHGB6Q9Y5F9 930 aa16.23■□□□□ 0.19
SAFB-207ENST00000589863 ATG13O75143 517 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 CKMT1AP12532 417 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 ZNF33BQ06732 778 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 LRIT3Q3SXY7 679 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PNCKQ6P2M8 343 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 BCDIN3DQ7Z5W3 292 aaKnown RBP16.22■□□□□ 0.19
SAFB-207ENST00000589863 CFAP206Q8IYR0 622 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 DEPDC4Q8N2C3 294 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 WDR36Q8NI36 951 aaKnown RBP16.22■□□□□ 0.19
SAFB-207ENST00000589863 VANGL1Q8TAA9 524 aaPredicted RBP16.22■□□□□ 0.19
SAFB-207ENST00000589863 GLYATL1Q969I3 302 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PIP5K1AQ99755 562 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 SPG21Q9NZD8 308 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 HCN4Q9Y3Q4 1203 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 XIRP2A4UGR9 3374 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 ALPK3Q96L96 1907 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 TRBV4-1A0A0J9YWV2 114 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PSMD11O00231 422 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 AGRPO00253 132 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 ARHGAP33O14559 1287 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 FFAR1O14842 300 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 KMOO15229 486 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 CYP7B1O75881 506 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 METAP1P53582 386 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PUM1Q14671 1186 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■□□□ 11.9
SAFB-207ENST00000589863 SSX1Q16384 188 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 ZNF284Q2VY69 593 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PTCHD4Q6ZW05 846 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 TRAM1L1Q8N609 369 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 TCEAL4Q96EI5 215 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 VPS35Q96QK1 796 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 SDHCQ99643 169 aaPredicted RBP16.22■□□□□ 0.19
SAFB-207ENST00000589863 EHD1Q9H4M9 534 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 MARCH7Q9H992 704 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 NMNAT1Q9HAN9 279 aaPredicted RBP16.22■□□□□ 0.19
SAFB-207ENST00000589863 CLEC2DQ9UHP7 191 aa16.22■□□□□ 0.19
SAFB-207ENST00000589863 PIPSLA2A3N6 862 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 SAGE2PA6NJ88 616 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 GPX5O75715 221 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 AP2A2O94973 939 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 C1orf105O95561 183 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 IL3P08700 152 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 SOX3P41225 446 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 TGM4P49221 684 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 LIM2P55344 173 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 UAP1L1Q3KQV9 507 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 DEPDC1Q5TB30 811 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 BRAT1Q6PJG6 821 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 ATCAYQ86WG3 371 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 SCAIQ8N9R8 606 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 GOT1L1Q8NHS2 421 aaPredicted RBP16.21■□□□□ 0.19
SAFB-207ENST00000589863 AP2M1Q96CW1 435 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 ACAT2Q9BWD1 397 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 SLC6A16Q9GZN6 736 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 ABCG4Q9H172 646 aa16.21■□□□□ 0.19
SAFB-207ENST00000589863 EXOSC4Q9NPD3 245 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms