RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 FUT8Q9BYC5 575 aa16.59■□□□□ 0.25
TPM4-206ENST00000587201 PRTFDC1Q9NRG1 225 aa16.59■□□□□ 0.25
TPM4-206ENST00000587201 OLAHQ9NV23 265 aa16.59■□□□□ 0.25
TPM4-206ENST00000587201 MRPS33Q9Y291 106 aaKnown RBP16.59■□□□□ 0.25
TPM4-206ENST00000587201 ANGPTL3Q9Y5C1 460 aa16.59■□□□□ 0.25
TPM4-206ENST00000587201 PRRC2CQ9Y520 2896 aaKnown RBP16.59■□□□□ 0.25
TPM4-206ENST00000587201 CPAMD8Q8IZJ3 1885 aa16.59■□□□□ 0.25
TPM4-206ENST00000587201 CCDC189A1A4V9 331 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 SAGE2PA6NJ88 616 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 E2F3O00716 465 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 CLDN4O14493 209 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 RASAL1O95294 804 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 CERS1P27544 350 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 ECHS1P30084 290 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 ST13P50502 369 aaKnown RBP16.58■□□□□ 0.24
TPM4-206ENST00000587201 E2F2Q14209 437 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 PFKFB4Q16877 469 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 MED27Q6P2C8 311 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 KIF2BQ8N4N8 673 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 TEX9Q8N6V9 391 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 CEP112Q8N8E3 955 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 FAM47BQ8NA70 645 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 SRFBP1Q8NEF9 429 aaKnown RBP16.58■□□□□ 0.24
TPM4-206ENST00000587201 ELP5Q8TE02 316 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 SLC44A1Q8WWI5 657 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 TAAR6Q96RI8 345 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 PAFAH2Q99487 392 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 NPAS2Q99743 824 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 UTP23Q9BRU9 249 aaKnown RBP16.58■□□□□ 0.24
TPM4-206ENST00000587201 CDCP1Q9H5V8 836 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 ANKRD10Q9NXR5 420 aa16.58■□□□□ 0.24
TPM4-206ENST00000587201 COL12A1Q99715 3063 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 POC1B-GALNT4F8VUJ3 575 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 MAN1A2O60476 641 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 SH3BGRLO75368 114 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 GP1BBP13224 206 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 SERPINB9P50453 376 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 ALDH18A1P54886 795 aaKnown RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 LIM2P55344 173 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 HSD17B7P56937 341 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 TUBA3CQ13748 450 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 RCN2Q14257 317 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 NAA30Q147X3 362 aaPredicted RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 SETDB1Q15047 1291 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 ZNF766Q5HY98 468 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 GRHL2Q6ISB3 625 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 TUBA3EQ6PEY2 450 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 TAOK1Q7L7X3 1001 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 MYLK4Q86YV6 388 aaPredicted RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 ZNF595Q8IYB9 648 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 LAS2Q8IYD9 372 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 TMEM52Q8NDY8 209 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 UHMK1Q8TAS1 419 aaKnown RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 ZNF473Q8WTR7 871 aaKnown RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 GPR78Q96P69 363 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 KCNC2Q96PR1 638 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 SLX1AQ9BQ83 275 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 MS4A8Q9BY19 250 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 ROGDIQ9GZN7 287 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 PRDM7Q9NQW5 492 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 PNO1Q9NRX1 252 aaKnown RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 CPSF2Q9P2I0 782 aaKnown RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 ERRFI1Q9UJM3 462 aaPredicted RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 DAPP1Q9UN19 280 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 SLC5A6Q9Y289 635 aa16.57■□□□□ 0.24
TPM4-206ENST00000587201 USP9XQ93008 2570 aaPredicted RBP16.57■□□□□ 0.24
TPM4-206ENST00000587201 GABRR3A8MPY1 467 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 KRT38O76015 456 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 TGFB1P01137 390 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 RNF224P0DH78 156 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 SERPINB1P30740 379 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 CD96P40200 585 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 HNRNPFP52597 415 aaKnown RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 OC90Q02509 493 aaPredicted RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 PCDH1Q08174 1060 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 DDX39BQ13838 428 aaKnown RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 OR1C1Q15619 314 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 CHSY3Q70JA7 882 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 RPS19BP1Q86WX3 136 aaKnown RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 SCUBE1Q8IWY4 988 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 LGI4Q8N135 537 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 PLD6Q8N2A8 252 aaKnown RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 NFAM1Q8NET5 270 aaPredicted RBP16.56■□□□□ 0.24
TPM4-206ENST00000587201 OR7G3Q8NG95 312 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 NR4A3Q92570 626 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 SIGLEC12Q96PQ1 595 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 CSF3RQ99062 836 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 TBCDQ9BTW9 1192 aa16.56■□□□□ 0.24
TPM4-206ENST00000587201 A0A087WUV0 522 aaPredicted RBP16.55■□□□□ 0.24
TPM4-206ENST00000587201 LRRC14BA6NHZ5 514 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 CYSRT1A8MQ03 144 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 RTCAO00442 366 aaKnown RBP16.55■□□□□ 0.24
TPM4-206ENST00000587201 KLK8O60259 260 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 MYO1DO94832 1006 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 DDAH2O95865 285 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 CRYABP02511 175 aaKnown RBP16.55■□□□□ 0.24
TPM4-206ENST00000587201 GTF2H2Q13888 395 aa16.55■□□□□ 0.24
TPM4-206ENST00000587201 PCBP2Q15366 365 aaKnown RBP eCLIP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms