RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 TMEM189-UBE2V1I3L0A0 370 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 J3QR06 171 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ADAM12O43184 909 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 IPO7O95373 1038 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 PGM3O95394 542 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 RETP07949 1114 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 QDPRP09417 244 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HOXB8P17481 243 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 UGT1A4P22310 534 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 FCARP24071 287 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ACADLP28330 430 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 EEF1DP29692 281 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 ATP5DP30049 168 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 BSGP35613 385 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ATP6V1E1P36543 226 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HNF4AP41235 474 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MAGEA11P43364 429 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 NKX2-1P43699 371 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 SLC11A1P49279 550 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HARS2P49590 506 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 NOVA1P51513 510 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 CDH11P55287 796 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 RPS3AP61247 264 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 RPL7AP62424 266 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 CEBPZQ03701 1054 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 LGALS3BPQ08380 585 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 TMEM115Q12893 351 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 GAGE2BQ13066 116 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 PPP2R5CQ13362 524 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 UBE2V1Q13404 147 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HNRNPDQ14103 355 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 MLF2Q15773 248 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 QRICH1Q2TAL8 776 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 LETM2Q2VYF4 491 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ZNF528Q3MIS6 628 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 GAGE2EQ4V326 116 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ODF2Q5BJF6 829 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 PLEKHS1Q5SXH7 462 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CYP4A22Q5TCH4 519 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 GAGE2AQ6NT46 116 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ZNF343Q6P1L6 599 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 PLBD1Q6P4A8 553 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 Q6ZR54 194 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 FAM47EQ6ZV65 393 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 IKBIPQ70UQ0 350 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 LRRTM1Q86UE6 522 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 KBTBD6Q86V97 674 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 OR8H3Q8N146 312 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 AVL9Q8NBF6 648 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 KCTD6Q8NC69 237 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 DEFB124Q8NES8 71 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 OR8H1Q8NGG4 311 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CHURC1Q8WUH1 139 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ZFAND2BQ8WV99 257 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HPSE2Q8WWQ2 592 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ING5Q8WYH8 240 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 HSD17B8Q92506 261 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 JAKMIP2Q96AA8 810 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CLDN23Q96B33 292 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 TBC1D31Q96DN5 1066 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MAGED4Q96JG8 741 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 NSMCE3Q96MG7 304 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 NECTIN4Q96NY8 510 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CDCA3Q99618 268 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 CLEC7AQ9BXN2 247 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MAK16Q9BXY0 300 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 API5Q9BZZ5 524 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 C2orf40Q9H1Z8 148 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CXCL16Q9H2A7 254 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 XAB2Q9HCS7 855 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 HEBP1Q9NRV9 189 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 INTS9Q9NV88 658 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 MARCH5Q9NX47 278 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 MIOSQ9NXC5 875 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 TAB2Q9NYJ8 693 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ERAP1Q9NZ08 941 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 EPS15L1Q9UBC2 864 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 GAGE2DQ9UEU5 116 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 TUBE1Q9UJT0 475 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 NDRG2Q9UN36 371 aaKnown RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 MOB4Q9Y3A3 225 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 ZFP37Q9Y6Q3 630 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 COL27A1Q8IZC6 1860 aaPredicted RBP2.36□□□□□ -2.03
VAPA-208ENST00000584796 NEDD4P46934 1319 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 FRMPD4Q14CM0 1322 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CCDC171Q6TFL3 1326 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 WDR19Q8NEZ3 1342 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 SDK2Q58EX2 2172 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 FBN3Q75N90 2809 aa2.36□□□□□ -2.03
VAPA-208ENST00000584796 CITO14578 2027 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 OTOGQ6ZRI0 2925 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 PLXNA2O75051 1894 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 PDZD2O15018 2839 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TCHHQ07283 1943 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 TMEM8BA6NDV4 472 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 NPIPB15A6NHN6 443 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.35□□□□□ -2.03
VAPA-208ENST00000584796 EPM2AB3EWF7 344 aa2.35□□□□□ -2.03
VAPA-208ENST00000584796 UBE2CO00762 179 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms